Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4811 |
Symbol | panB |
ID | 3717247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5427974 |
End bp | 5428774 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_350539 |
Protein GI | 77461032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0730618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.02449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCCA TCACCCTGAC CACGCTCCAG AGCCTCAAGC AGAAAGGTGA AAAGATCACC ATGCTGACCT GCTATGACGC GACCTTCGCC CACGCCTGCA ATGAGGCCGG TGTCGAAGTG CTGCTGGTGG GCGACTCCCT CGGCATGGTC CTGCAGGGTC ACGACAGCAC CCTGCCGGTG ACCACCGCAG AAATGGCCTA CCACGTTGCC AGCGTCAAAC GCGGCAACTC TGATGCCCTG ATCCTGGCCG ACCTGCCGTT CATGGCCAAC GCCACCCTCG AGCAAACCAT GACCAACAGT GCCCTGCTGA TGCAGGCCGG CGCGCACATG GTCAAGGTCG AAGGCGCCTT GTGGCTGGCG GACTCGATCC GCCTGCTGGC CGAACGCGGC GTGCCGGTCT GCGCTCACAT GGGCCTGACC CCGCAAGCCG TGAACATTCT CGGTGGCTAT AAAGTGCAGG GTCGCAACGA GAACCAGGCA CGCCAGATGC GCGCCGACGC GATCTCCCTG GAGCAGGCCG GCGCGGCCAT GCTGCTGCTC GAATGCGTGC CGAGCGAACT GGCGGCTGAA ATCACCCAGG CGGTGAAGAT TCCGGTGATC GGCATTGGCG CCGGCAGCGA CACCGACGGC CAGGTGCTGG TACTGCACGA CATGCTCGGC CTGTCGATCA GCGGCCGTGT GCCAAAATTC GTGAAGAACT TCATGCAGGG TCAGGACAGC ATCCAGTCCG CGCTGAAGGC TTACGTCAGT GAAGTCAAAG CCACCACTTT CCCCGGGATC GAACACGGAT TCTCTGCATG A
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Protein sequence | MPAITLTTLQ SLKQKGEKIT MLTCYDATFA HACNEAGVEV LLVGDSLGMV LQGHDSTLPV TTAEMAYHVA SVKRGNSDAL ILADLPFMAN ATLEQTMTNS ALLMQAGAHM VKVEGALWLA DSIRLLAERG VPVCAHMGLT PQAVNILGGY KVQGRNENQA RQMRADAISL EQAGAAMLLL ECVPSELAAE ITQAVKIPVI GIGAGSDTDG QVLVLHDMLG LSISGRVPKF VKNFMQGQDS IQSALKAYVS EVKATTFPGI EHGFSA
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