Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4802 |
Symbol | |
ID | 3716622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5416735 |
End bp | 5417448 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | sugar fermentation stimulation protein A |
Protein accession | YP_350530 |
Protein GI | 77461023 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0371486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.006792 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTTTC ATCCTCCTCT TGAAGAAGGC CGGTTGATCC GGCGTTACAA GCGTTTTCTC GCCGATATCG AAACCGTTGG CGGCGAGTTG CTGACCATTC ATTGCCCCAA TACCGGCTCG ATGCTCAATT GCCAGGTCGA GGGCGGGCAG GTCTGGTTCA GCCGCTCCAA TGATCCGAAG CGCAAGCTGC CCGGTACCTG GGAAGTCGGC GAAACCCCGC AGGGCCGGCT GTTTTGCGTG AATACCGGAC GCGCCAACGC ACTGGTCGAA GAAGCCTTGC AGGCGGGTGT CATCAATGAG TTGAACGGTT TCACCGGGCT CAAGCGCGAA GTGGCGTATG GACAGGAAAA GAGTCGGATC GATTTTCGCC TCGACTATCC GACGGGCCCG GCCTACGTGG AAGTGAAGAG TGTCACGCTG GGTTTCGACG GAACGGCAGT GGCGGCGTTT CCCGATGCGG TGACAGAGCG CGGCGCCAAG CATTTGCGTG AGCTGGCGCA TCTGGCGCGG GACGGGATTC GTGCGGTGCA GTTGTACTGC GTCAATCTCA CGGGAGTCGA GGCGGTGCGT CCAGCCGAGG AAATCGACTT CGCCTACGCC GCTGCGCTGC GTGAGGCGGT GGCGTGCGGG GTCGAAGTCC TGGCGTACGG CGTGCGGTTG AGCCATGAAG AGATGGTGAT CGACCGGCGG CTGGACGTGC TGCTCAACGG TTAG
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Protein sequence | MRFHPPLEEG RLIRRYKRFL ADIETVGGEL LTIHCPNTGS MLNCQVEGGQ VWFSRSNDPK RKLPGTWEVG ETPQGRLFCV NTGRANALVE EALQAGVINE LNGFTGLKRE VAYGQEKSRI DFRLDYPTGP AYVEVKSVTL GFDGTAVAAF PDAVTERGAK HLRELAHLAR DGIRAVQLYC VNLTGVEAVR PAEEIDFAYA AALREAVACG VEVLAYGVRL SHEEMVIDRR LDVLLNG
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