Gene Pfl01_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4790 
Symbol 
ID3716610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5405652 
End bp5405987 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350518 
Protein GI77461011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0241764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00156998 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAGTC GTTTCTCCAA GGTCGCCGAT CAATTGCTGT TGATCGAGCG TGAACTGCGC 
GCCCAGGGCT GGTGGGATGA CGTCCAGCCC TCGGTCGAAG CCCTGAGCAG CGTCGAGCCG
TTTTCGGTCG ACACCCTCGA TTTCGAGCAG TGGCTGCAAT GGATCTTCCT GCCGCGGATG
AAGATTATTC TTGAGCAGAA TCTGCCATTG CCCAATGCCT CGGGCATTCA GGAAATGGCT
GAGATGGTCT TCGCCCAGCG CAATCTGCAG GGCAAGGATC GGCAGCTTCA GGTGTTGCTC
AAAGAGTTCG ACCTGCTGAT CACCGCTTCA CGCTGA
 
Protein sequence
MDSRFSKVAD QLLLIERELR AQGWWDDVQP SVEALSSVEP FSVDTLDFEQ WLQWIFLPRM 
KIILEQNLPL PNASGIQEMA EMVFAQRNLQ GKDRQLQVLL KEFDLLITAS R