Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4780 |
Symbol | |
ID | 3715393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5389366 |
End bp | 5391669 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350508 |
Protein GI | 77461001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0797853 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATT TGCCTGTAGC GAAAACCCGA CCGGCTTCGA ACTGGTCTGC CATCTGGGTG CTGCCCCTGA TCGCTCTGAT TATCGGCGGC TGGCTCGGCT GGCGTGCCTA TAACGAAACC GGCATCGAGA TTCAGGTGCG GTTTGAAAGC GGTGAAGGCA TTCAGGCCAA CAAGACCGAG GTGGTCTACA AAGGCATGCC GGTCGGCAAG GTGAAAGCCC TCAAGCTCGA TGATGAAGGC AACTCCAAAG GTGTCATCGC GACCATCGAG ATGAACAAGG ATGTCGATCA GTACCTGAAG ACCAGCACCC GTTTCTGGCT GGTCAAGCCA AGCGTGACCC TGGCCGGGAT CACCGGCCTG GAGACCCTGG TATCGGGTAA CTACGTCGCC ATCAGCCCCG GCGAAGGCGA GCCGACCCGC AAGTTCAAGG CCCTGGCCGA AGAGCCACCG CTATCGGACT CCAAGCCCGG CCTGCACCTG ACGATCAAGG CCGATCGCCT CGGTTCGTTG AATCGCGGCA GCCCAGTGTT CTACAAGCAG ATCAAAGTGG GTCAGATCAA AAGTTACGTG CTGTCGGAAG ACCAGAGCAC CGTCGAACTC AAGGTGTTCA TCGAACCGAC CTACGCCAAA CTGGTGCGCA AACACACCCG TTTCTGGAAC GCCAGCGGCA TCAGCATCGA CGCCAACCTG TCCGGGGTGA AAGTGCGCAG CGAATCCCTG GCCAGCATCG TCGCCGGCGG TATTGCCTTT GCTACCCCGG AGAACCGCAA GGACAGCCCG CCTACCGATC CAAGCCTGCC GTTCCGTCTC TACGAAGACT TCGATGCGGC CGCCGCCGGT ATCCGTGTAA AGGTCAAACT CAGCGATTTC GAGGGCCTCC AAGCCGGGCG CACTCCAGTG ATGTACAAGG GCATTCAGGT CGGTAACCTG AAAGCGCTGA AAATCGATCC TGACCTGTCC AGCGCCACCG CCGAACTGAC TCTCGACCCG CTGGCTGAAG ACTATCTGGT CACCGGCACG CAATTCTGGG TGGTCAAACC ATCGATCTCC CTGGCCGGCA TCACCGGTCT GGAAGCGTTG GTAAAAGGTA ACTACATCGC CGTACGCCCG GGTGACAAGG GTGGTGCGCC ACAGCGTGAA TTCGAAGCCC GGCCCAAAGC GCCGCCGCTG GATCTGCGCG CACCCGGCCT GCACCTGGTG TTGTTCACCG ATACCCTCGG CTCGATCGAT GTCGGCAGCC CGATCCTCTA CAAGCAGGTC AAGGTCGGTT CGGTGCAGAG TTATCAGTTC TCCAAGACCC GCAAGCAACT GGTGATCGGC GTCCACATCG AGAAGGAATA CGAAAACCTG GTCAACGCCT CGACCCGGTT CTGGAACGTC AGCGGCGTCA CGCTGACCGG CGGTTTGACC GGTGGGATTC AGGTCAAGAG TGAATCGCTG CAGACCCTGA TGGCCGGCGG CATCGCCTTC GAAACCCCGC AAGCCAAGGC ACCGCTGCAA AAACGCATTC CGCGCTTCCG TCTGTTCGCC AGCCATGATG AAGCGAATCA GAAAGGCGCC GTCGTCACCA TCAAGGTCGA TCGCGCGGAC GGACTGCGCA GCGGCACCCC GGTTCGCTTC AAAGGCCTGG ACGTTGGCAA GATCGAAAGC GTCGACCTGA CCGATGATCT GCAATCGGTG ATCCTCACCG CGCGCATCAC CGAAGTGCCG GAGAAGATCG CACGGGTCGG CAGCCAGTTC TGGGTGGTCA AACCGGAATT GGGTCTGATC AAGACCTCGA ACCTGGAGAC CCTGGTCACC GGCCAGTACA TCGAAGTGCA ACCGGCGGCC AAGAACCTCG GCCCGCAGAA GAACTTCGTG GCCCTGGCCA ATCCGCCGGA AGTCACCAAG CAAGAGGCTG GCTTGAGTCT GGTATTGAGC GCTGCCCGTC GCGGCTCGCT GAAACCGGGT GTTCCGGTGA CTTACCGAGA GATCACCGTG GGCAAAGTCA CAGGTTACGA ACTGGGCCAG ACCGCGGATC GCGTACTGGT GCACATCCTG ATCGAGCCGA AATACGCCCC GTTGGTGCGC AGCGGCAGTC GCTTCTGGAA CACCAGTGGC GTCGGTTTCG ACATCGGCCT GTTCAAAGGC GTAACGGTGC GCACGGAGTC GCTTGAGACA GCGATTCAGG GTGGCATTGC CTTCGCCACG CCGGACGGCG AGCAGATGGG CAACCCCGCG CGCGCCGAGC AAACCTTCCC GCTGTTCGAC AAGTTCGAAG ACGAGTGGCT GACCTGGGCA CCGAAAATTC CCCTCGGCAA ATAA
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Protein sequence | MTDLPVAKTR PASNWSAIWV LPLIALIIGG WLGWRAYNET GIEIQVRFES GEGIQANKTE VVYKGMPVGK VKALKLDDEG NSKGVIATIE MNKDVDQYLK TSTRFWLVKP SVTLAGITGL ETLVSGNYVA ISPGEGEPTR KFKALAEEPP LSDSKPGLHL TIKADRLGSL NRGSPVFYKQ IKVGQIKSYV LSEDQSTVEL KVFIEPTYAK LVRKHTRFWN ASGISIDANL SGVKVRSESL ASIVAGGIAF ATPENRKDSP PTDPSLPFRL YEDFDAAAAG IRVKVKLSDF EGLQAGRTPV MYKGIQVGNL KALKIDPDLS SATAELTLDP LAEDYLVTGT QFWVVKPSIS LAGITGLEAL VKGNYIAVRP GDKGGAPQRE FEARPKAPPL DLRAPGLHLV LFTDTLGSID VGSPILYKQV KVGSVQSYQF SKTRKQLVIG VHIEKEYENL VNASTRFWNV SGVTLTGGLT GGIQVKSESL QTLMAGGIAF ETPQAKAPLQ KRIPRFRLFA SHDEANQKGA VVTIKVDRAD GLRSGTPVRF KGLDVGKIES VDLTDDLQSV ILTARITEVP EKIARVGSQF WVVKPELGLI KTSNLETLVT GQYIEVQPAA KNLGPQKNFV ALANPPEVTK QEAGLSLVLS AARRGSLKPG VPVTYREITV GKVTGYELGQ TADRVLVHIL IEPKYAPLVR SGSRFWNTSG VGFDIGLFKG VTVRTESLET AIQGGIAFAT PDGEQMGNPA RAEQTFPLFD KFEDEWLTWA PKIPLGK
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