Gene Pfl01_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4780 
Symbol 
ID3715393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5389366 
End bp5391669 
Gene Length2304 bp 
Protein Length767 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350508 
Protein GI77461001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0797853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT TGCCTGTAGC GAAAACCCGA CCGGCTTCGA ACTGGTCTGC CATCTGGGTG 
CTGCCCCTGA TCGCTCTGAT TATCGGCGGC TGGCTCGGCT GGCGTGCCTA TAACGAAACC
GGCATCGAGA TTCAGGTGCG GTTTGAAAGC GGTGAAGGCA TTCAGGCCAA CAAGACCGAG
GTGGTCTACA AAGGCATGCC GGTCGGCAAG GTGAAAGCCC TCAAGCTCGA TGATGAAGGC
AACTCCAAAG GTGTCATCGC GACCATCGAG ATGAACAAGG ATGTCGATCA GTACCTGAAG
ACCAGCACCC GTTTCTGGCT GGTCAAGCCA AGCGTGACCC TGGCCGGGAT CACCGGCCTG
GAGACCCTGG TATCGGGTAA CTACGTCGCC ATCAGCCCCG GCGAAGGCGA GCCGACCCGC
AAGTTCAAGG CCCTGGCCGA AGAGCCACCG CTATCGGACT CCAAGCCCGG CCTGCACCTG
ACGATCAAGG CCGATCGCCT CGGTTCGTTG AATCGCGGCA GCCCAGTGTT CTACAAGCAG
ATCAAAGTGG GTCAGATCAA AAGTTACGTG CTGTCGGAAG ACCAGAGCAC CGTCGAACTC
AAGGTGTTCA TCGAACCGAC CTACGCCAAA CTGGTGCGCA AACACACCCG TTTCTGGAAC
GCCAGCGGCA TCAGCATCGA CGCCAACCTG TCCGGGGTGA AAGTGCGCAG CGAATCCCTG
GCCAGCATCG TCGCCGGCGG TATTGCCTTT GCTACCCCGG AGAACCGCAA GGACAGCCCG
CCTACCGATC CAAGCCTGCC GTTCCGTCTC TACGAAGACT TCGATGCGGC CGCCGCCGGT
ATCCGTGTAA AGGTCAAACT CAGCGATTTC GAGGGCCTCC AAGCCGGGCG CACTCCAGTG
ATGTACAAGG GCATTCAGGT CGGTAACCTG AAAGCGCTGA AAATCGATCC TGACCTGTCC
AGCGCCACCG CCGAACTGAC TCTCGACCCG CTGGCTGAAG ACTATCTGGT CACCGGCACG
CAATTCTGGG TGGTCAAACC ATCGATCTCC CTGGCCGGCA TCACCGGTCT GGAAGCGTTG
GTAAAAGGTA ACTACATCGC CGTACGCCCG GGTGACAAGG GTGGTGCGCC ACAGCGTGAA
TTCGAAGCCC GGCCCAAAGC GCCGCCGCTG GATCTGCGCG CACCCGGCCT GCACCTGGTG
TTGTTCACCG ATACCCTCGG CTCGATCGAT GTCGGCAGCC CGATCCTCTA CAAGCAGGTC
AAGGTCGGTT CGGTGCAGAG TTATCAGTTC TCCAAGACCC GCAAGCAACT GGTGATCGGC
GTCCACATCG AGAAGGAATA CGAAAACCTG GTCAACGCCT CGACCCGGTT CTGGAACGTC
AGCGGCGTCA CGCTGACCGG CGGTTTGACC GGTGGGATTC AGGTCAAGAG TGAATCGCTG
CAGACCCTGA TGGCCGGCGG CATCGCCTTC GAAACCCCGC AAGCCAAGGC ACCGCTGCAA
AAACGCATTC CGCGCTTCCG TCTGTTCGCC AGCCATGATG AAGCGAATCA GAAAGGCGCC
GTCGTCACCA TCAAGGTCGA TCGCGCGGAC GGACTGCGCA GCGGCACCCC GGTTCGCTTC
AAAGGCCTGG ACGTTGGCAA GATCGAAAGC GTCGACCTGA CCGATGATCT GCAATCGGTG
ATCCTCACCG CGCGCATCAC CGAAGTGCCG GAGAAGATCG CACGGGTCGG CAGCCAGTTC
TGGGTGGTCA AACCGGAATT GGGTCTGATC AAGACCTCGA ACCTGGAGAC CCTGGTCACC
GGCCAGTACA TCGAAGTGCA ACCGGCGGCC AAGAACCTCG GCCCGCAGAA GAACTTCGTG
GCCCTGGCCA ATCCGCCGGA AGTCACCAAG CAAGAGGCTG GCTTGAGTCT GGTATTGAGC
GCTGCCCGTC GCGGCTCGCT GAAACCGGGT GTTCCGGTGA CTTACCGAGA GATCACCGTG
GGCAAAGTCA CAGGTTACGA ACTGGGCCAG ACCGCGGATC GCGTACTGGT GCACATCCTG
ATCGAGCCGA AATACGCCCC GTTGGTGCGC AGCGGCAGTC GCTTCTGGAA CACCAGTGGC
GTCGGTTTCG ACATCGGCCT GTTCAAAGGC GTAACGGTGC GCACGGAGTC GCTTGAGACA
GCGATTCAGG GTGGCATTGC CTTCGCCACG CCGGACGGCG AGCAGATGGG CAACCCCGCG
CGCGCCGAGC AAACCTTCCC GCTGTTCGAC AAGTTCGAAG ACGAGTGGCT GACCTGGGCA
CCGAAAATTC CCCTCGGCAA ATAA
 
Protein sequence
MTDLPVAKTR PASNWSAIWV LPLIALIIGG WLGWRAYNET GIEIQVRFES GEGIQANKTE 
VVYKGMPVGK VKALKLDDEG NSKGVIATIE MNKDVDQYLK TSTRFWLVKP SVTLAGITGL
ETLVSGNYVA ISPGEGEPTR KFKALAEEPP LSDSKPGLHL TIKADRLGSL NRGSPVFYKQ
IKVGQIKSYV LSEDQSTVEL KVFIEPTYAK LVRKHTRFWN ASGISIDANL SGVKVRSESL
ASIVAGGIAF ATPENRKDSP PTDPSLPFRL YEDFDAAAAG IRVKVKLSDF EGLQAGRTPV
MYKGIQVGNL KALKIDPDLS SATAELTLDP LAEDYLVTGT QFWVVKPSIS LAGITGLEAL
VKGNYIAVRP GDKGGAPQRE FEARPKAPPL DLRAPGLHLV LFTDTLGSID VGSPILYKQV
KVGSVQSYQF SKTRKQLVIG VHIEKEYENL VNASTRFWNV SGVTLTGGLT GGIQVKSESL
QTLMAGGIAF ETPQAKAPLQ KRIPRFRLFA SHDEANQKGA VVTIKVDRAD GLRSGTPVRF
KGLDVGKIES VDLTDDLQSV ILTARITEVP EKIARVGSQF WVVKPELGLI KTSNLETLVT
GQYIEVQPAA KNLGPQKNFV ALANPPEVTK QEAGLSLVLS AARRGSLKPG VPVTYREITV
GKVTGYELGQ TADRVLVHIL IEPKYAPLVR SGSRFWNTSG VGFDIGLFKG VTVRTESLET
AIQGGIAFAT PDGEQMGNPA RAEQTFPLFD KFEDEWLTWA PKIPLGK