Gene Pfl01_4778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4778 
Symbol 
ID3715391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5385758 
End bp5386459 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350506 
Protein GI77460999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.920095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.11895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTTG ATCTATCCGA ACTGTCTCAG CTGGCGCCGA TCTTTCGCGA GCTGTTCAAG 
GGCTACCACG TCAGCCGTCG CGACCCGGAG CTGTACGCGC AACTGTCGAA CTTCCAGGAC
CAGTACCGCA CGCTGTTCAA GGCGCTGGGC TTCGAACTGG TCTGCGACAC CCGTGGTTTC
TACTACTTCG TGCCGGACAT GGCCGCAGCG GCGGTGAACA AGACCGCTCA GCGCCTGGCG
CTGTTCACTT TCATCCTGGT CGAGCATCTG GCCGATCAGG GCCGCGACCC GATCGCCGTG
CTCGACGGCG GCAGCCTCGG CCGTGAAGAA CTGCCGTCGC TGCTGGAAAA GTACCGCGAC
CTGTTCATCC AGGCCGAAGT GCAGACCGTC GAAGAACTCG AAGAAAAAAT CATGCGCCGC
ATGACCCAGC TCGGTTTCGC CAGCGAGGAA AACGGTGTGT ACCGTTTCCT GCCGCCGATG
CACCGGTTCC TCGACGTCTG CCTGTCGGTC CAGCAGGACC GCGATCTGGC GGCCAGCGTG
CACAGCGTTC TGCCGCTGCC GGCACCGGTA CTGATCGACG AAGAGGCCGA GGCCAAATTC
CTCGCCACCG ACGACCCGCT CGATCTTTCC GAATTTGAGG AAGAAAGCGA AGAAGACGCA
CTGGCCCGCG CCATTGCCGA AGAACAGGAG TCCGACGCAT GA
 
Protein sequence
MHLDLSELSQ LAPIFRELFK GYHVSRRDPE LYAQLSNFQD QYRTLFKALG FELVCDTRGF 
YYFVPDMAAA AVNKTAQRLA LFTFILVEHL ADQGRDPIAV LDGGSLGREE LPSLLEKYRD
LFIQAEVQTV EELEEKIMRR MTQLGFASEE NGVYRFLPPM HRFLDVCLSV QQDRDLAASV
HSVLPLPAPV LIDEEAEAKF LATDDPLDLS EFEEESEEDA LARAIAEEQE SDA