Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4750 |
Symbol | |
ID | 3715171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5353680 |
End bp | 5355404 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350478 |
Protein GI | 77460971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.447535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.153995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAT CTTCCGCGTT GCTCCTCGCT TTTGTCTTCC TCAGCGGCTG CCAGGCCTTG GCCCCCGTTT CGCAGGACGG TGCCTCACCG GTCGAAGACA CCACGCCGGC TCCTGAAAAG CCCAAGGTTT ACAGCTCGTT CAGCCAGGAA ACGGTGTTCA GCCTGCTGAG CGCCGAACTC GCCGGCCAGC GCAATCGTTT CGACATTGCC CTGGACAACT ACGTGACCCA GGCCATCAAC ACCCAGGATC CGGGCGTTTC CGAGCGTGCC TTCCGCATCG CCGAGTACCT GGGCGCCGAC CAGCCGGCCC TCGATACCGC ACTGATCTGG GCGAAAAACG CCCCTGACGA CCTCGAAGCG CAACGCGCCG CCGCCGTGCA ACTGGCTCGT GCAGGGCGTT ATGACGACTC GATGGTCTAT ATGGAGAAAG TCCTGCAGGG CAAGGGCGAC ACCCATTTCG ACTTCCTCGC GCTATCGGCC GCCGACACCG ATCAGGAAAC CCGCAACGGC CTGATGAAAA GCTTCGACCG CCTGTTGCAG CGTCACCCGA ACAACAATCA GCTGATTTTC GGCAAGGCCC TGCTGATGCA GCAGGACGGC GACACCCAAG GTGCGCTGAC CCTGCTTGAA GACAATCCGC CGGAAGATGG CGAGATCGCC CCGATTCTGC TGCGTGCACG CCTGCTGCAA GGGCTGAACC GTGGCGACGA AGCCTTGCCG CTGTTACAGA AAAGCATCAA GAAATACCCG GACGACAAGC GCTTGCGCCT GACTTACGCG CGGATGCTGG TGGAACAGGA CCGGATGGAC GATGCCAAGG TCGAGTTCTC CACCCTGGTT CAGCAATACC CGGAAGACGA CGAACTGCGT TACTCGCTGG CACTGGTCTG CCTGGAAGCC AAGGCCTGGG ACGAGGCCAA GGGTTATCTG GAAGACCTGA TCGCCCGGGA AAGCCATGTC GATTCGGCGC ACCTGAACCT GGGCCGCATC GCCGAAGAAC GCAACGACCC ACAAGGCGCG CTTATCGAAT ACGCCCAGGT CGGCCCCGGC AACGACTATC TGCCGGCGCA ACTGCGTCAG GCCGATATTC TGATGAACAA CGGCAAGACC GCCGAAGCCC AGAGCAAACT CGCCGCCGAG CGTGACGAGC AGCCGGATTA CGCGATCCAG CTGTACCTGA TCGAAGCCGA AACCCTGTCC GCCAACAATC AGGGCGACAA GGCCTGGAAA GTCCTGCAAC AAGCGCTGCA GCAATACCCG GACGATCTGA ATCTGCTTTA TACCCGTGCG ATGCAGGCGG AAAAACGCAA TGACCTGGCG CAAATGGAAA AAGACCTGCG CCTGATCATC AAGCGCGATC CGGATAACGC CATGGCCCTC AATGCCCTCG GCTACACCCT GTCCGACCGC ACCACCCGCT ACGCTGAAGC CAAGGCGCTG ATCGAGCAGG CGCACCAGAT CAACCCGGAA GACCCGGCGG TTCTCGACAG CCTCGGCTGG GTGAACTTCC GCATGGGCAA TCTGGAAGAC GCCGAGAAAT ACCTGCGTCA GGCCCTCGAG CGCTTCCCCG ATCACGAAGT CGCCGCGCAT CTGGGCGAAG TGCTGTGGGC CAAGGGCAAA CAGCGCGAAG CGAAACAAAT CTGGGGCAAG TTCCTCAAGG ACCAGCCTGA CAGCACCATC CTGCGCAGCA CCATCAAGCG CCTGACCGGA TCCGAGACTC TTTAA
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Protein sequence | MNRSSALLLA FVFLSGCQAL APVSQDGASP VEDTTPAPEK PKVYSSFSQE TVFSLLSAEL AGQRNRFDIA LDNYVTQAIN TQDPGVSERA FRIAEYLGAD QPALDTALIW AKNAPDDLEA QRAAAVQLAR AGRYDDSMVY MEKVLQGKGD THFDFLALSA ADTDQETRNG LMKSFDRLLQ RHPNNNQLIF GKALLMQQDG DTQGALTLLE DNPPEDGEIA PILLRARLLQ GLNRGDEALP LLQKSIKKYP DDKRLRLTYA RMLVEQDRMD DAKVEFSTLV QQYPEDDELR YSLALVCLEA KAWDEAKGYL EDLIARESHV DSAHLNLGRI AEERNDPQGA LIEYAQVGPG NDYLPAQLRQ ADILMNNGKT AEAQSKLAAE RDEQPDYAIQ LYLIEAETLS ANNQGDKAWK VLQQALQQYP DDLNLLYTRA MQAEKRNDLA QMEKDLRLII KRDPDNAMAL NALGYTLSDR TTRYAEAKAL IEQAHQINPE DPAVLDSLGW VNFRMGNLED AEKYLRQALE RFPDHEVAAH LGEVLWAKGK QREAKQIWGK FLKDQPDSTI LRSTIKRLTG SETL
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