Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4749 |
Symbol | hemA |
ID | 3715170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5352211 |
End bp | 5353497 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | glutamyl-tRNA reductase |
Protein accession | YP_350477 |
Protein GI | 77460970 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.168503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0710553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTTCC TTGCACTCGG TATCAACCAC AAGACTGCTT CAGTAGACGT CCGCGAGCGC GTGGCCTTTA CCCCTGAGCA GCTGGTGGAG GCCTTGCAGC AGCTCTGCCG ACTCACCGAC AGCCGCGAAG CTGCGATCCT CTCCACCTGC AATCGCAGTG AGCTGTATAT AGAACAGGAT CAGCTTTCGG CCGATATCGT GCTGCGCTGG CTGGCCGACT ATCACCATTT AAGCCTCGAT GAGCTGCGCG CGAGTGCTTA TGTGCATGAA GATGATGCGG CAGTTCGTCA CATGATGCGT GTCGCCTCCG GGCTCGACTC GCTGGTGCTG GGCGAACCGC AGATTCTCGG CCAGATGAAA TCGGCCTACG CCGTGGCCCG CGAGGCCGGC ACCATCGGGC CGCTGCTGGG GCGACTGTTC CAGGCGACCT TCAACGCCGC CAAGCAAGTA CGTACCGACA CCGCCATCGG CGAAAACCCG GTGTCCGTGG CGTTTGCCGC CGTCAGTCTG GCCAAACAGA TTTTCAGCGA CCTGCAACGC AGCCAGGCCC TGCTGATCGG CGCCGGCGAG ACCATCACCC TGGTCGCCCG CCACCTGCAT GAACTGGGGG TCAAGCGCAT CGTGGTCGCC AACCGGACGC TGGAGCGCGC CAGCCTGCTG GCCGAGCAGT TCGGTGCCCA CGCAGTGTTG CTCTCGGACA TCCCGGCCGA ACTGGTGCGC AGCGACATCG TCATCAGTTC TACCGCCAGT CAGTTGCCGA TTCTCGGTAA AGGCGCGGTG GAAAGCGCGC TGAAGCTGCG CAAGCACAAG CCGATCTTCA TGGTCGACAT CGCCGTTCCC CGTGACATCG AGCCAGAAGT CGGCGAACTC GACGACGTTT ACCTCTATAG CGTCGACGAT CTGCACGAAG TGGTCGCTGA AAACCTCAAG AGCCGTCAGG GCGCAGCGCA GGCGGCCGAA GAGATGGTTT CGGTCGGCGC CGACGATTTC ATGGTGCGCC TGCGCGAGCT GGCGGCAGTC GATGTGCTCA AGGCCTATCG TCAACAGAGC GAACGCCTGC GCGACGAAGA ACTGCAAAAG GCCCTGCGCC TGCTGGCCAA TGGCGGCAAC GCCGAAGACG TGCTCGGGCA ACTGGCCCGT GGCCTGACCA ACAAACTCCT GCACGCCCCG AGCGTGCAGT TGAAAAAGCT TTCTGCCGAA GGCCGCCTCG ATGCGCTGGC CATGGCTCAG GAACTCTTTG CCCTCGAGGG CTCACCGGAT AGCTTTTCGG ATAAAAAACC GCAATGA
|
Protein sequence | MAFLALGINH KTASVDVRER VAFTPEQLVE ALQQLCRLTD SREAAILSTC NRSELYIEQD QLSADIVLRW LADYHHLSLD ELRASAYVHE DDAAVRHMMR VASGLDSLVL GEPQILGQMK SAYAVAREAG TIGPLLGRLF QATFNAAKQV RTDTAIGENP VSVAFAAVSL AKQIFSDLQR SQALLIGAGE TITLVARHLH ELGVKRIVVA NRTLERASLL AEQFGAHAVL LSDIPAELVR SDIVISSTAS QLPILGKGAV ESALKLRKHK PIFMVDIAVP RDIEPEVGEL DDVYLYSVDD LHEVVAENLK SRQGAAQAAE EMVSVGADDF MVRLRELAAV DVLKAYRQQS ERLRDEELQK ALRLLANGGN AEDVLGQLAR GLTNKLLHAP SVQLKKLSAE GRLDALAMAQ ELFALEGSPD SFSDKKPQ
|
| |