Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4747 |
Symbol | |
ID | 3715168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5350301 |
End bp | 5351131 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | modification methylase HemK |
Protein accession | YP_350475 |
Protein GI | 77460968 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0844052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0658003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCA TCGCCAGCCT GTTGCGCGCC GCCGAACTGC CGGACTCGCC CACCGCGCGT CTGGACGCCG AATTGCTTCT GGCTGCCGCG CTGGGCAAAT CCCGCAGTTT TCTCCACACC TGGCCCGAGC GCATCGTGCC CAGCGAAGCC GCTCTGGTTT TTGCCGAGTA CCTGCAACGT CGCCGCGGCG GCGAGCCGGT CGCCTACATT CTGGGTCAGC AGGGTTTCTG GAAGCTCGAT CTGGAAGTCG CGCCGCACAC GCTGATCCCG CGCCCGGACA CCGAACTGCT GGTGGAGGCC GCACTGGAAT TGCTGCCGGC GACTCCGGCA AAAGTTCTCG ATCTGGGCAC CGGCAGCGGG GCGATTGCCC TGGCTCTGGC CAGCGAGCGC CCGGCGTGGA AAGTCACCGC CGTGGATCGC GTGCTGGAAG CCGTGGCCCT GGCCGAACGC AATCGCCAGC GCCTGCACCT GAACAACGCG ACGGTGCTGA GCAGTCACTG GTTCAGCGCC CTCGAAGGCA AGCGTTTCGA GTTGATCATC AGCAATCCGC CGTACATTCG CGCCGCCGAT CCGCATCTGA TGGAAGGCGA TGTGCGTTTC GAGCCGGAAA GCGCCTTGGT GGCCGGCATC GACGGGCTCG ACGATCTGCG CCTGATCATC GCCCAGGCGC CGGCCCATCT GGAAGCCGGC GGCTGGCTGA TGCTCGAACA TGGCTATGAT CAAGCCGAAG CCGTGCGCGA TCTGCTGCTG ACGCAAGGTT TCGACGAAGT CCACAGCCGC ACCGATCTGG GCGGCCATCA ACGGATCAGC CTGGGGCGCC TGCCGTGCTG A
|
Protein sequence | MTIIASLLRA AELPDSPTAR LDAELLLAAA LGKSRSFLHT WPERIVPSEA ALVFAEYLQR RRGGEPVAYI LGQQGFWKLD LEVAPHTLIP RPDTELLVEA ALELLPATPA KVLDLGTGSG AIALALASER PAWKVTAVDR VLEAVALAER NRQRLHLNNA TVLSSHWFSA LEGKRFELII SNPPYIRAAD PHLMEGDVRF EPESALVAGI DGLDDLRLII AQAPAHLEAG GWLMLEHGYD QAEAVRDLLL TQGFDEVHSR TDLGGHQRIS LGRLPC
|
| |