| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4728 |
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| Symbol | upp |
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| ID | 3715149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5333914 |
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| End bp | 5334552 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_350456 |
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| Protein GI | 77460949 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.202262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.748721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCC AAGAGATCCG CCATCCGCTG ATCCGTCACA AACTTGGCCT TATGCGCCGT
GCAGACATCA GCACCAAGAA TTTCCGTGAG CTCGCTCAGG AAGTCGGTGC CCTGTTGACC
TATGAAGCTA CCAAAGACCT GCCGCTGGAA ACCTACGATA TCGAAGGTTG GTGCGGCACC
GTGTCGGTCG AGAAAATCGC CGGCAAGAAG ATCACCGTCG TGCCGATCCT GCGTGCCGGC
ATCGGCATGC TCGAAGGCGT GCTGAGCCTG ATCCCGGGTG CGAAAGTCAG CGCCGTCGGC
GTTGCCCGTA ACGAAGAAAC CCTGCAGGCC CACACCTATC TGGAAAAACT GGTTCCGGAA
ATCGACGAAC GCCTGGCGAT GATCATCGAC CCGATGCTCG CCACCGGCAG CTCCATGGTC
GCGACCATCG ACCTGCTGAA GAAGGCCGGT TGCAAGGACA TCCGTGCGAT GGTGCTGGTT
GCCGCGCCGG AAGGCATTGC CGCTGTCGAG CAAGCCCACC CGGACGTGAT CATCTACACC
GCGTCCATCG ATCAGAAACT CAACGAGCAC GGTTACATCA TTCCTGGGCT TGGCGACGCC
GGTGACAAGA TCTTCGGCAC CAAGCAGAAG GACGCGTAA
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| Protein sequence | MSIQEIRHPL IRHKLGLMRR ADISTKNFRE LAQEVGALLT YEATKDLPLE TYDIEGWCGT
VSVEKIAGKK ITVVPILRAG IGMLEGVLSL IPGAKVSAVG VARNEETLQA HTYLEKLVPE
IDERLAMIID PMLATGSSMV ATIDLLKKAG CKDIRAMVLV AAPEGIAAVE QAHPDVIIYT
ASIDQKLNEH GYIIPGLGDA GDKIFGTKQK DA
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