Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4714 |
Symbol | |
ID | 3714806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5322512 |
End bp | 5323330 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | peptidase M48, Ste24p |
Protein accession | YP_350442 |
Protein GI | 77460935 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.134186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0690011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAGA CATTGGTTGT AAGTGCACTG AGCGCAGCGC TGTTGCTGGC CGGTTGTCAG TCGGTCAACA CCACCAGCGG CGGTGCCGTG GGCGTCGAGC GCAAGCAGTA CATGTTCAGC ATGCTGTCCT CGCAAGAGGT CGACCAGATG TATGCCCAGT CCTATCAGAA GACCGTGGGC GAAGCGTCCA GCAAAGGCGT GCTGGACAAG ACCAGCAACG ATGCCAAACG TGTTCAGGCG ATTGCCAACC GCTTGATCGC TCAGGCGCCG AACTTCCGTC CGGATGCGGC GCAATGGCAG TGGGAAGTGA ACCTGATCAA GAGCGACGAG CTCAACGCCA ATTGTGGTCC TGGCGGCAAG ATCATTTTCT ACACCGGTCT GATCGACAGC CTGAAACTCA CCGACGATGA AATCGCCGCG GTCATGGGTC ATGAAATCGC CCACGCCCTG CGCGAGCATG GTCGTGAAGC CATGTCCAAG GCTTATGGCA TCGAAATGGC CAAGCAGGGC GCCGGTGCGT TGCTCGGCCT GGGGCAGGAC AGCCTGGCGC TGGCCGACAC CGTGGCCAAC TACGGCATGA CGCTGCCCAA CAGCCGCGCT AACGAGAACG AGGCCGACCT GATCGGTCTG GAACTGGCCG CGCGTGCTGG GTACAACCCG AATGCTGCCA TTACCCTGTG GAACAAGATG AGCAAGGCCT CTGAAGGCGC GCCGCCGGAG TTCATGAGCA CTCACCCGTC CTCCAGCAGT CGCACCGCTG CCTTGCAGGC GGCGATTCCG AAGGTCATGC CGCTTTACGA GAAAGCGCCC AAGTCCTGA
|
Protein sequence | MNKTLVVSAL SAALLLAGCQ SVNTTSGGAV GVERKQYMFS MLSSQEVDQM YAQSYQKTVG EASSKGVLDK TSNDAKRVQA IANRLIAQAP NFRPDAAQWQ WEVNLIKSDE LNANCGPGGK IIFYTGLIDS LKLTDDEIAA VMGHEIAHAL REHGREAMSK AYGIEMAKQG AGALLGLGQD SLALADTVAN YGMTLPNSRA NENEADLIGL ELAARAGYNP NAAITLWNKM SKASEGAPPE FMSTHPSSSS RTAALQAAIP KVMPLYEKAP KS
|
| |