| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4705 |
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| Symbol | |
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| ID | 3714621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5307043 |
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| End bp | 5310444 |
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| Gene Length | 3402 bp |
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| Protein Length | 1133 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | peptidase M10A and M12B, matrixin and adamalysin |
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| Protein accession | YP_350433 |
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| Protein GI | 77460926 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0427656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC CACTTGGTAA CACCGAAAGC CGCATCTCTT TCCTCACCGG TAACCCTGAC
GTCAACAGCT TGATTTCCGG GACTCAATGG CTTCCATTCG GCTCGTCTCC GACCGTTGAT
CTGACGTACA GTTTTATCGC TCCGCGCACG TCCTACTTTG CCAATGCCTA CAGCTCGGTC
AATGAGTACA ACGCAGTATT CTCCCTTTAC ACCGGTCAGA AGACTGCAAT TTCCAATGCA
CTCTCGACGT GGAGCGCAGT TGCCAACGTC ACCTTCACAA TGGTCCGCGA AAGTGCTGCG
AGCGTTGGAG ATCTGCGATT TGGCGGCTAT TCGGGAATGG ATAACAAAAC CGCTGCTTGG
GCATACCTCC CTGACAATAC CCCCAAGGGT GGAGATGTAT GGATCGGTCC GTCCACCGAT
GAACTCTTTC CGTCGAAAGG CTCTTACGAC TACCTGACCT TCGTGCACGA AATCGGTCAT
GCGATCGGCC TCAAGCATCC GTTCTCGGCC GGCACACTTA ATCCGACAGT GCTCCAGCCG
CTTCTGGACG ACGTCAAGTA CACGGTCATG AGCTACAACG ACAACTATTC GTATCAGCCC
ACGACGCCCA TGGTTCTGGA CATTCTGGCC ATCCAGTCGC TCTACGGTGC AAACGGACTC
TGGCAAAGCG GCAATACCAC CTATAGCTGG GCTCCCAATC AGCAAATTTT TGAAACGATC
TGGGATGCCG GCGGCAATGA CACCATTGAC GCAAGCAATC AACTGGCTTC GGTTCGGATC
AACCTAAATG AAGGACAATA CAGCCAGATC GGCAAGGCGT TCACTAATCT GACGACCAAT
GCCGCCTTCA ATGAAGGTCT GGGGATTGCG TATGGCGCCA AAATCGAAAA CGCCGTGGGT
TCGGATTTCG GTGACTGGCT GATCGGCAAC GCACTGGACA ATGTTCTTAA TGGACGAGGT
GGTGCCGACA CCATGGAAGG TGGAGCAGGC AACGATACTT ACTACGTCGA CAACGTCGGT
GATGTCGTTA TCGAACGCGG AAGTTCCTTG TCTGAAATTG ACACGGTCAT CTCTACGATC
AGCTATACGT TGGGTGCCAA CGTCGAAAAC CTGATACTCC AAGGCGGAGC AGAAAACCTC
AATGCCACGG GCAATGCCCT GAACAACACG CTGAGAGGCA ACGCAGGCAA CAACCTTCTG
GATGGTGGCA CTGGTGCCGA CATCATGATC GGTGGTCTGG GCAACGATAC CTATGTCGTT
GACAGCCTGC TGGATACCGT GATCGAAACC AGCAACCTGC CAACTGAAAT CGATACCGTG
CTTTCGGCGG TAAATTTCGC GTTGGGTGCT AACCTGGAAA ACCTGACACT TCTTGGCACT
GCCGACATCA ATGGCAACGG AAACGCGCAG AACAACGTTC TGATCGGCAA CGCCGGTAAC
AATGTCCTCA ATGGTATGGG CGGCCTGGAC ACCATGATTG GTGGTGCAGG ACACGACCTC
TATATTCTGG ATCAGGCCGG CGAGCTGGGA CTGATACAAG AGCAGGCCAA TGAAGGCACC
GATACGCTCT ATATCAGCTA CGTCGCAGGT GCAGGCACAA CCGTCATCGA CCTCAACCGG
AACAACCTCC TCAACGTGGA AAACGTCACG CTCGATAATA TCAACACCGG ACCATTCACG
GTGCTGGGCA ACACATCGAG CAACGTTCTG ATCGGCAATA TCGGCAATAA CGTTCTGGAC
GGCGGCATCG GCGCCGACTA CATGGCCGGC GGCGCAGGCA ATGACACTTA CTATGTGGAC
AATATTGGCG ACACTGTTGT CGAGACAGGT AACTCGCTGA CTGAAATCGA CACGGTGCTG
TCTACCGTCA GCTACGCCCT GGGCAACAAC GTTGAAGTTC TGGCTCTTCT CGGTGCCAAT
AACCTCAACG GTACCGGTAA TGCCCTGAAC AACTATATGG TCGGTAACAT CGGCGACAAT
ATCCTCAACG GCGGCGCTGG AGCCGACACC CTTATTGGCG GTTTCGGCAA CGATACCTAC
ATCGTGGATA ACGCTTTGGA TGTGGTTGTG GAAACCAGCA ACGATCCTAA CGAGATTGAC
ACCGTTCGTG CATCGGTCAA TTGGCAGCTT GGCACCAACC TGGAAAACCT GACCCTGACC
GGCAATACAA ACCTCAATGG CAATGGCAAC GAGTTGAATA ACGTGCTGGT CGGCAATGCC
GCCAACAACG TGCTCAACGG CATGGGCGGC CTGGATACCA TGATTGGCGG CGCAGGCAAC
GACACGTACG TACTTGACCA GTTTGGTGAG CTGGCACTGG TGCAGGAACA GGCCAGCGAA
GGCACCGATA CCCTTTACAT TGCCTACACG GCGGGTTTCG GCACCACCGT CATTGACCTT
AACGGCAGCA ACTTGCAGAA CGTCGAAAAC GTCACGCTGG ACCCTGCCAA TACCAGTCCG
TTCAGCATTC TCGGCAACGC CCAGAACAAC ACGTTGTTTG GCAACGCAGG CAATAACGTT
CTCAATGGCG GGGCAGGGAT CGACAACCTT ATCGGTGGCA CCGGCAATGA CACTTACATC
GTGGACAACC AATACGATGT GGTACTGGAA ACCAGCACCG ATCCTAACGA AATCGATACC
ATTCAGTCGT CGGTGAGCTG GCAGCTTGGC GCCAACGTCG AGAACCTGAC CCTGACCGGC
AATAACAACC TCAACGGCAA CGGCAACGGG CTGAACAACG TGCTGATCGG CAATGCCGGC
AACAACGTAC TCAACGGAAT GGCAGGCCTG GACACCATGA TCGGCGGCAC AGGAAACGAC
ACCTATGTAC TTGACCAGTT CGGCGAGCTA GCACTGGTGA AGGAACAGGC CAACGAAGGC
ACTGACACCC TTTATGTCGC CTACACCGCA GGCTTCGGCA CCACCGTTAT TGACCTGAAC
AACAGCAACC TGCTGAACTT CGAAAACGTC ACACTGGATC CTGGCAACAC CAGCCCGTTC
ACCGTTACTG GCAATGCGCT GAACAACACC TTGATCGGCA ATGCAGGAAA TAACGTTCTC
AACGGCGGAG CTGGGGCCGA CCTGCTGACC GGCGGAGCCG GTGCCGACAC CTTCGTGTTC
TCGGCAGTCA ATGAGATGGG AACCGGTGCC AACCGTGACG TCATCACTGA CTTCAGCAGC
CTGCAGGGCG ACAAGATCGA CCTGAGCAAA TTCGACGCCA ACCTGTTGAG TGCCGGTTTC
AACGGCTTCA GCTTCATCGG CGCGAATGAC TTCACCGGCG CAGGCCAGTT GCGCTTTGTC
GATCACGTGC TGTCAGGCAA CGTCAGCGGC AACGCCGGTG CGGACTTTGA AATCCAGCTG
GTGGGTGTGA ACAGTTTCAG CGCCAATGAT CTGGTGGCCT GA
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| Protein sequence | MPTPLGNTES RISFLTGNPD VNSLISGTQW LPFGSSPTVD LTYSFIAPRT SYFANAYSSV
NEYNAVFSLY TGQKTAISNA LSTWSAVANV TFTMVRESAA SVGDLRFGGY SGMDNKTAAW
AYLPDNTPKG GDVWIGPSTD ELFPSKGSYD YLTFVHEIGH AIGLKHPFSA GTLNPTVLQP
LLDDVKYTVM SYNDNYSYQP TTPMVLDILA IQSLYGANGL WQSGNTTYSW APNQQIFETI
WDAGGNDTID ASNQLASVRI NLNEGQYSQI GKAFTNLTTN AAFNEGLGIA YGAKIENAVG
SDFGDWLIGN ALDNVLNGRG GADTMEGGAG NDTYYVDNVG DVVIERGSSL SEIDTVISTI
SYTLGANVEN LILQGGAENL NATGNALNNT LRGNAGNNLL DGGTGADIMI GGLGNDTYVV
DSLLDTVIET SNLPTEIDTV LSAVNFALGA NLENLTLLGT ADINGNGNAQ NNVLIGNAGN
NVLNGMGGLD TMIGGAGHDL YILDQAGELG LIQEQANEGT DTLYISYVAG AGTTVIDLNR
NNLLNVENVT LDNINTGPFT VLGNTSSNVL IGNIGNNVLD GGIGADYMAG GAGNDTYYVD
NIGDTVVETG NSLTEIDTVL STVSYALGNN VEVLALLGAN NLNGTGNALN NYMVGNIGDN
ILNGGAGADT LIGGFGNDTY IVDNALDVVV ETSNDPNEID TVRASVNWQL GTNLENLTLT
GNTNLNGNGN ELNNVLVGNA ANNVLNGMGG LDTMIGGAGN DTYVLDQFGE LALVQEQASE
GTDTLYIAYT AGFGTTVIDL NGSNLQNVEN VTLDPANTSP FSILGNAQNN TLFGNAGNNV
LNGGAGIDNL IGGTGNDTYI VDNQYDVVLE TSTDPNEIDT IQSSVSWQLG ANVENLTLTG
NNNLNGNGNG LNNVLIGNAG NNVLNGMAGL DTMIGGTGND TYVLDQFGEL ALVKEQANEG
TDTLYVAYTA GFGTTVIDLN NSNLLNFENV TLDPGNTSPF TVTGNALNNT LIGNAGNNVL
NGGAGADLLT GGAGADTFVF SAVNEMGTGA NRDVITDFSS LQGDKIDLSK FDANLLSAGF
NGFSFIGAND FTGAGQLRFV DHVLSGNVSG NAGADFEIQL VGVNSFSAND LVA
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