Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4700 |
Symbol | |
ID | 3714616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5302709 |
End bp | 5303338 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350428 |
Protein GI | 77460921 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00659716 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0518536 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAA CCCCTGTAGT GATTGATGGC CCGGTGGGGC AACTTGAGTC TTTGTATCTG GACAATGAGC AGCCACGCGG CATCGCGCTG ATCTGCCACC CGAACCCGGT GCAGGGCGGC ACCATGCTCA ACAAGGTCGT CTCGACCCTG CAGCGCACCG CGCGCGACGC GGGTCTTATC ACCTTGCGCT TCAACTATCG CGGCGTCGGT GCCAGCGAAG GTTCCCATGA CATGGGCACT GGTGAGGTCG ACGACGCCCA GGCCGCTGCC GCCTGGTTGC TGGAAAAGCA TCCGGAGCTG CCGTTGACCC TGTTCGGCTT CTCTTTCGGC GGATTTGTTG CAGCAAGTCT CGGCGGTCGT CTCGAAGCCC AAGGCATTCA GCTCAAGCAC CTGTTCATGG TCGCGCCGGC GGTGATGCGC CTGGGCGAGC AGGATCAACT GCCGCAGCAG GGCGAGTTGA CCGTGATCCA GCCGGAAACA GACGAAGTGA TCGATCCGCC GCTGGTCTAC GACTGGTCTG AAAAACTCCC GCGCCCCCAT GAGCTACTGA AAGTGGCAGA ATGCGGACAC TTTTTTCATG GCAAGCTGAC CGATCTCAAG GATCTGATCC TGCCGCGTCT CTCGAATTGA
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Protein sequence | MRETPVVIDG PVGQLESLYL DNEQPRGIAL ICHPNPVQGG TMLNKVVSTL QRTARDAGLI TLRFNYRGVG ASEGSHDMGT GEVDDAQAAA AWLLEKHPEL PLTLFGFSFG GFVAASLGGR LEAQGIQLKH LFMVAPAVMR LGEQDQLPQQ GELTVIQPET DEVIDPPLVY DWSEKLPRPH ELLKVAECGH FFHGKLTDLK DLILPRLSN
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