Gene Pfl01_4690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4690 
Symbol 
ID3714606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5292722 
End bp5293504 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content56% 
IMG OID 
Productubiquinol-cytochrome c reductase cytochrome c1 subunit 
Protein accessionYP_350418 
Protein GI77460911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.222111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0239811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TATTTTTTGC TCTGATTTTT GCTGCTCTGC CAGTGCTGTC TTTCGCGGCC 
GAACACGGTG GTCCGGAACT GGAAAAGGTC GACATCGACG TTTCCGACAA GGCTGCCCTG
CAGGATGGCG CGCGTACTTT CGCCAACTAT TGCATGGGCT GCCACAGTGC CAAGTTCCAG
CGTTACGAGC GTGTGGCCGA TGACCTCGGT GTTCCGCACG AACTGATGCT GGAAAAACTG
GTGTTCACCG GCGCCAAGAT CGGCGATCAC ATGAACATCG GCATGCAGCC GGCCGACGCC
AAGACCTGGT TCGGCGCAGC GCCGCCAGAC CTGACGCTGG TGGCTCGTGT TCGCGGCACC
GACTGGCTCT ACGGTTACCT CAAGTCGTTC TACGAAGATC CTGCGCGTCC ATGGGGCGTG
AACAACAAGG TCTTCCCGAA CGTCGGCATG CCCAACGTGC TGGTCGGCCT GCAAGGTCGC
CAGGTTGTGG GTTGCAAACA GGTACAGATC GTCGAGGACG GCAAGAAGCA ATATGACCCG
CTGACCGGTA CGCCTCTGAC TCATGAAGCG TGCGATCAGT TGACCATCGT GCCGAAAACC
GGAAGTCTCA ACGAAGAGCA GTTCGATGAG AAGGTCAAGA ATCTGGTAAC CTTCCTGGCT
TACTCGGCTA ACCCGGTTAA GCTGCAACAT CAGCGCATCG GTACTTACGT CTTGCTGTAC
CTGGCGTTCT TCTTTGTGTT CGCCTACCTG CTCAAGCGTG AATACTGGAA AGACGTGCAC
TGA
 
Protein sequence
MKKLFFALIF AALPVLSFAA EHGGPELEKV DIDVSDKAAL QDGARTFANY CMGCHSAKFQ 
RYERVADDLG VPHELMLEKL VFTGAKIGDH MNIGMQPADA KTWFGAAPPD LTLVARVRGT
DWLYGYLKSF YEDPARPWGV NNKVFPNVGM PNVLVGLQGR QVVGCKQVQI VEDGKKQYDP
LTGTPLTHEA CDQLTIVPKT GSLNEEQFDE KVKNLVTFLA YSANPVKLQH QRIGTYVLLY
LAFFFVFAYL LKREYWKDVH