Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4686 |
Symbol | gmhA |
ID | 3714587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5290306 |
End bp | 5290899 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | phosphoheptose isomerase |
Protein accession | YP_350414 |
Protein GI | 77460907 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.493935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0490355 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGC AATCCCGAAT TCGCCAGCTT TTCCAGGCCA GCATCGACAC CAAGCAACAG GCGATGGACG TACTTGCACC GCACATCGAG CAAGCCAGCC AGGTGATGGT CAACGCCCTG CTCAACGAGG GCAAAATGCT CTCGTGCGGT AACGGCGGCT CGGCCGGCGA TGCCCAGCAC TTCTCCTCGG AACTGCTCAA CCGTTTCGAG CGTGAGCGCC CGAGCCTGCC GGCGATCGCG CTGACCACCG ACAGCTCGAC CATCACCTCG ATCGCCAACG ACTACAGCTA CAACGAAGTG TTTTCCAAGC AGATTCGCGC ACTCGGCCAG CCGGGCGACG TATTGCTGGC GATTTCGACC AGCGGCAACT CGGCGAACAT TATTCAGGCG ATCCAGGCCG CACATGATCG CGAAATGATT GTCGTAGCAT TGACCGGACG CGATGGCGGA GGCATGGCTT CACTGCTGCT GCCCGAAGAC GTCGAGATTC GCGTACCGGC CAACGTCACC GCACGTATTC AGGAAGTCCA CTTGCTAGCG ATCCATTGCC TTTGCGATCT GATCGACAGC CAACTGTTCG GGAGTGAAGA ATGA
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Protein sequence | MDMQSRIRQL FQASIDTKQQ AMDVLAPHIE QASQVMVNAL LNEGKMLSCG NGGSAGDAQH FSSELLNRFE RERPSLPAIA LTTDSSTITS IANDYSYNEV FSKQIRALGQ PGDVLLAIST SGNSANIIQA IQAAHDREMI VVALTGRDGG GMASLLLPED VEIRVPANVT ARIQEVHLLA IHCLCDLIDS QLFGSEE
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