| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4677 |
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| Symbol | |
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| ID | 3714577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5279866 |
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| End bp | 5281233 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_350405 |
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| Protein GI | 77460898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.814262 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.15672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAGG CCCTGAAACT CAGCGAACTG ACCAACGCGC TCGACGCCCG TCTGATCAGC
GCCGATGCCA GTTTTGACGG TGTGAGCATC GACAGCCGCG CGATCAAGGC TGGCCAACTG
TTTATCGCCC TGACCGGTCC GCGTTTCGAC GGTCATGACT ATTTGAATGA AGTCGCCGCC
AAAGGCGCCG TTGCGGCATT GGTCGAACGT GAAGTCGCCG ACAGCACGCT GCCGCAATTG
CTGGTCAAGG ATACCCGTCA GGCTCTCGGC CAGTTGGGTG CCTTGAACCG TGCCGCATTC
ACCAAACCGG TTGCGGCAGT CACCGGCTCC AGCGGCAAGA CCACGGTCAA GGAAATGCTC
GCGAGCATCC TGCGCACACG CGGTTCGGTA CACGCGACCC GTGGCAACCT GAACAACGAC
CTCGGCGTAC CGCTGACCCT GCTCGAACTC GCCCCGGAAC ACAGCGCGGC AGTGATCGAA
CTGGGCGCCT CGCGTCTAGG TGAAATCGCC TACACCGTAG GGCTGACCAA GCCGCACGTA
GCGATCCTCA ACAACGCCGG AACCGCCCAC GTCGGTGAGT TCGGCGGGCC GGAGAAAATC
GTCGAAGCCA AAGGCGAAAT CATCGAAGGG CTGGCGGCCG ACGGCGTCGC TGTGCTGAAC
CTCGATGACA AGGCGTTTGG CATCTGGAAG ACCCGCGCTG CCGGTCGCAA AGTGCTGACT
TTCGCATTGA GCAACACTCA GGCGGACTTC CATGCCAGCG ATCTGGCCAC CGATGCCCGT
GGCTGCCCGG CGTTCAACCT GCACAGTCCT GAAGGTGTGG AACGGGTTCA ACTGAACCTG
CTCGGCACTC ATAACGTCGC CAACGCCATG GCCGCTGCTG CTGCTGCGCA CGCCTTGGGT
GTGTCGCTGT TCGGCATCGC CACCGGGCTT GGCGCGGTAC AACCGGTCAA GGGTCGCACC
GTCGCGCAAC TGGCGAAAAA CGGCATGCGC GTGATCGATG ACACTTACAA CGCGAACCCC
ACCTCGATGT GCGCGGCCGT TGATATACTC GCCGGCTTTT CCGGCCGCAC CGTCCTGGTG
CTCGGGGATA TCGGCGAGTT GGGCGACTGG GCGGAGCAGG GGCATCGCGA CGTGGGCGAA
TACGCCCGGG GCAAGGTTTC CGCGCTATAC GCCGTCGGGC CGAACATGGT CCACGCCGTG
AGCGCATTCG GTAACGAGGC GCAGCACTTC GGCACACAGG CCGAACTGAT CCAGGCTCTC
GGCGCCGAGC AGGACACAAA CACCACCATT TTGATCAAGG GTTCGCGCAG CGCAGCGATG
GAAAACATCG TTGCGGCCCT GTGCGGGTCC AGTCTGGAGA AACATTAA
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| Protein sequence | MLKALKLSEL TNALDARLIS ADASFDGVSI DSRAIKAGQL FIALTGPRFD GHDYLNEVAA
KGAVAALVER EVADSTLPQL LVKDTRQALG QLGALNRAAF TKPVAAVTGS SGKTTVKEML
ASILRTRGSV HATRGNLNND LGVPLTLLEL APEHSAAVIE LGASRLGEIA YTVGLTKPHV
AILNNAGTAH VGEFGGPEKI VEAKGEIIEG LAADGVAVLN LDDKAFGIWK TRAAGRKVLT
FALSNTQADF HASDLATDAR GCPAFNLHSP EGVERVQLNL LGTHNVANAM AAAAAAHALG
VSLFGIATGL GAVQPVKGRT VAQLAKNGMR VIDDTYNANP TSMCAAVDIL AGFSGRTVLV
LGDIGELGDW AEQGHRDVGE YARGKVSALY AVGPNMVHAV SAFGNEAQHF GTQAELIQAL
GAEQDTNTTI LIKGSRSAAM ENIVAALCGS SLEKH
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