| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4672 |
|---|
| Symbol | murC |
|---|
| ID | 3714572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5273705 |
|---|
| End bp | 5275165 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramate--L-alanine ligase |
|---|
| Protein accession | YP_350400 |
|---|
| Protein GI | 77460893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0155778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.483786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGA ATCAGAAAGC CATGCCGCAA CCGGAAATGC GCCGCATCCG TCGCATCCAC
TTCGTCGGGA TCGGCGGCGT GGGCATGTGC GGCATCGCCG AAGTGCTGCT GAACCTGGGC
TATGAAGTGT CCGGTTCGGA CCTGAAAGCT TCGCCGGTGA CCGAGCGCCT GGAATCCTTC
GGTGCGCAGA TCTTCATCGG CCACCGTGCC GAGAACGCCG CTGCCGCCGA TGTGCTGGTG
GTGTCGAGCG CCGTCAACAC CTCCAACCCG GAAGTGGCGA CCGCACTGGA ACGCCGCATC
CCGGTGGTGC CGCGTGCCGA AATGCTCGCC GAACTGATGC GCTACCGCCA CGGCATCGCC
GTCGCCGGTA CCCATGGCAA AACCACCACC ACCAGCCTGA TCGCTTCGGT GTTCGCGGCG
GGTGGCCTGG ATCCGACCTT CGTCATCGGT GGCCGTTTGA ATGCTGCGGG CACCAATGCC
CAGCTCGGCA CCAGCCGTTA TCTGATTGCC GAAGCCGATG AAAGCGACGC AAGCTTCCTG
CATCTGCAGC CGCTGGTGGC TGTGGTCACC AATATCGACG CCGACCACAT GGCGACCTAC
GACGGTGACT TCAACAAACT GAAGAAAACC TTCGTCGAGT TCCTGCACAA CCTGCCGTTC
TACGGTCTGG CGGTGATGTG CCTGGACGAT CCGGTGGTGC GTGAAATCCT GCCGCTGGTC
AAGCGTCCGA CCGTGACCTA TGGCTTCAGC GAAGACGCCG ACGTGCGCGC GATCAATGTT
CGTCAGCAGG GCATGCAGAC CTTCTTTACC GTGCTGCGCC CTGATCGCGA GCCTCTTGAT
GTGTCCGTGA ACATGCCGGG CAATCACAAC GTGCTCAATT CCCTGGCGAC CATCTGCATC
GCCACCGACG AAGGCGTCAG CGACGAGGCC ATCGTCCAGG GCCTGTCCGG CTTCCAGGGT
GTCGGCCGAC GCTTCCAGGT CTACGGCGAA CTGCCGGTGG ACGGCGGCAA TGTGATGCTG
GTCGACGACT ACGGTCACCA CCCGACCGAA GTCGCAGCCG TGATCAAAGC CGTGCGCGGT
GGCTGGCCGG AGCGCCGTCT GGTGATGGTC TACCAGCCGC ACCGTTACAG CCGCACCCGC
GACCTGTACG ACGATTTCGT CAATGTCCTG GCCGACGCCA ACGTGCTGCT GCTGATGGAA
GTCTACCCGG CCGGCGAAGA GCCGATCCCG GGCGCCGACA GCCGCAAGCT GTGCAACAGC
ATCCGCCAGC GCGGTCAGCT CGACCCGATC TACATCGAGC GCGGCGTCGA TCTGGCGCCA
CTGGTCAAGC CGCTGCTGCG TGCCGGCGAC ATTCTGCTGT GCCAGGGCGC CGGTGACATC
GGCGGTCTCG CACCGAAACT GTTGAAAAGC GAGTTGTTCG CCGGTGCCGT GGCGGCATCG
GTCGAGGGGA AGTTGAAATG A
|
|---|
| Protein sequence | MVENQKAMPQ PEMRRIRRIH FVGIGGVGMC GIAEVLLNLG YEVSGSDLKA SPVTERLESF
GAQIFIGHRA ENAAAADVLV VSSAVNTSNP EVATALERRI PVVPRAEMLA ELMRYRHGIA
VAGTHGKTTT TSLIASVFAA GGLDPTFVIG GRLNAAGTNA QLGTSRYLIA EADESDASFL
HLQPLVAVVT NIDADHMATY DGDFNKLKKT FVEFLHNLPF YGLAVMCLDD PVVREILPLV
KRPTVTYGFS EDADVRAINV RQQGMQTFFT VLRPDREPLD VSVNMPGNHN VLNSLATICI
ATDEGVSDEA IVQGLSGFQG VGRRFQVYGE LPVDGGNVML VDDYGHHPTE VAAVIKAVRG
GWPERRLVMV YQPHRYSRTR DLYDDFVNVL ADANVLLLME VYPAGEEPIP GADSRKLCNS
IRQRGQLDPI YIERGVDLAP LVKPLLRAGD ILLCQGAGDI GGLAPKLLKS ELFAGAVAAS
VEGKLK
|
|---|
| |