Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4633 |
Symbol | |
ID | 3713790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5232135 |
End bp | 5234054 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350361 |
Protein GI | 77460854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.753582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.334854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCGA CACCTGATGA CCTGAGCCCG TTGCCCGCTG TTCTGGCCGG GCCACTGCTG CGCCGAATGC AACCGACGCG CTTAGTGCTT TGGCTGGTGG GCAGCCGCGA ACTGTCGTTG ACCTTGCGCC TGCAAGGCGT AGGAGACATT TCACTGGATG CCGGGAAATG CACGGTCATT CCGGTAGGTA CCCGGGCGTT TGTTCACCTC ATCGATGTCC CCCTCGAAAC CGCCCTGCCC TGCGACACCC GCATCGACTA CGACCTGTTG ATCGATGGCA AGCAGCCGAT CGCCGACTGG GCGCCGCACC TGCTCTACGA CGACGCCACC GGCCCGAACT TCGTCCTGCG CTCGCGCATC GACCAGTTGC TCCACGGTTC CTGCCGCAAG CCCCATCATC CGGCCGCCGA CGGTTTGCTC TGTGTTGACC GGTTGCTGGC CGCCGAAACC GATCCGCAGC AACGTCCCGC CCTGTTGATG ATGAGCGGTG ATCAGGTTTA CGCCGACGAT GTGGCCTGTC CGATGTTGCG GGCGATTCAT GCCTTGATCG AGCGCCTCGG TCTGTTCGGT GAACACCTCG AAGGCGCAGT AGTCAGCGAC AGCGCGAAAC TCTACGAACA CCCGGCCAGT TACTACCATC GCGCGGATTT GCTGCCGGCA CTGGAAAGCA ACGAGACACT GCGCGAGCGT TTCTTCGGCG GTGCGCGCAA GCCGATTTTC ACCAGCAGCA GCGCCGACAA TCACCTCGTG ACGTTTGCCG AAGTCATGGC GATGTATTTG CTGGTGTGGT CGCCAACACC CTGGACACTG GTCAATCCGC AGCCACCGGC ACTGACGCCT GAACGCCTCA AGCGCTATGC CCTTGAACAG ACCCGCATCG ACGGGTTCAA GGCCGGCCTC GGCCAGGTGG CCCGGGCACT GGCGCATCTG CCGAGCCTGA TGATCTTCGA TGACCACGAC ATCACCGATG ACTGGAACCT CTCCGCGCAA TGGGAGGAAA CGGCCTACGG CCACCCGTTC TCCAAACGCA TCATCGGCAA CGCGCTGATC GCCTACATGC TGTGTCAGGG TTGGGGCAAC AATCCGGATG CATTCAGCGC AGTGCTGGAG AAAACCCGCG GCCTGAGCGC CAACGGTGAC GACCGCTACC TCGACGCTCC CGTGCAGGAC GAATTGATTG AGGAATTGCT GCGCTTTCAG CAATGGCATT TCGTATTGCC GACCAGCCCG GCGCTGGTGG TGCTCGATAC CCGCACCCGA CGCTGGCGCA GCGAAATGGC ACTCAAGCAG CCGTCGGGCC TGCTGGACTG GGAAGCCTTG AGCGAACTGC AGCAGGAACT GCTCGACCAT CCTTCGGCGA TCATCGTTTC GCCGGCACCG ATCTTCGGCG TGAAGCTGAT CGAAACCGTG CAGCGAGTAT TCAGCTGGTG CGGTTATCCA CTGCTGGTGG ACGCAGAAAA CTGGATGGCC CATCGCGGCG CCGCCCAGGT GATCCTGAAC ATTTTCCGAC ACTCGCGTAC ACCGGGCAGC TACGTGGTGC TGTCAGGCGA CGTGCATTAT TCCTTCGTCT ACGAAGTCTT GATCCGACAC CGCAAGGCCG GCCCGCGCAT CTGGCAAATC ACCAGCAGCG GCATCAAGAA CGAATTTCCC CCGACCCTGT TGGAATGGTT CGACCGTCTC AACCGCTGGC TCTACTCACC ACGCTCGCCG CTCAACTGGC TGACCAAACG CCGCCGCATG CGCATCGTCC CGTACGTCCC GGAACACGCA GAAGCGGGTG AGCGACTGTG GAATTCGGCG GGGATCGGCC AGGTATTTTT CAATCATCAG GGACAGCCGA GCGACATCAT CCAGCACAAC GCGAACGGCG CACCGAAGAC CCGGATGCTG GCGCCGGATT TGTCGGACTA CCCTGATTAG
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Protein sequence | MPPTPDDLSP LPAVLAGPLL RRMQPTRLVL WLVGSRELSL TLRLQGVGDI SLDAGKCTVI PVGTRAFVHL IDVPLETALP CDTRIDYDLL IDGKQPIADW APHLLYDDAT GPNFVLRSRI DQLLHGSCRK PHHPAADGLL CVDRLLAAET DPQQRPALLM MSGDQVYADD VACPMLRAIH ALIERLGLFG EHLEGAVVSD SAKLYEHPAS YYHRADLLPA LESNETLRER FFGGARKPIF TSSSADNHLV TFAEVMAMYL LVWSPTPWTL VNPQPPALTP ERLKRYALEQ TRIDGFKAGL GQVARALAHL PSLMIFDDHD ITDDWNLSAQ WEETAYGHPF SKRIIGNALI AYMLCQGWGN NPDAFSAVLE KTRGLSANGD DRYLDAPVQD ELIEELLRFQ QWHFVLPTSP ALVVLDTRTR RWRSEMALKQ PSGLLDWEAL SELQQELLDH PSAIIVSPAP IFGVKLIETV QRVFSWCGYP LLVDAENWMA HRGAAQVILN IFRHSRTPGS YVVLSGDVHY SFVYEVLIRH RKAGPRIWQI TSSGIKNEFP PTLLEWFDRL NRWLYSPRSP LNWLTKRRRM RIVPYVPEHA EAGERLWNSA GIGQVFFNHQ GQPSDIIQHN ANGAPKTRML APDLSDYPD
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