Gene Pfl01_4628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4628 
Symbol 
ID3713648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5228434 
End bp5229405 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content51% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_350356 
Protein GI77460849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.303761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGT CATCCCAGAA ACGCGCCTTT CGTACCCCTG AAAGCATCCA AGCCGAAAGT 
GAAACCCGAG GAATGCTCAA ACCATTCTTA GAAGGGAGGG GCTTCACCGA GGTTACTGAC
CGCCGTAAAG GGCATTCTCA ATTGATCACG GCCACCAGTC CTGAAGGTTT GAAGTTCAGC
GCTCGGGTCA GATTGTGTTG GCGCTGGGAG GATCAACCGG AAAAATACTC CGCAGCACAG
TTACGCGCGC GGTTAAAAGA TGGCGATTGG GATTTAACAA TCGCTGAGCT GGTTGGTCGC
GAAGCTACCC ACGGGGTGAC ACATGCGCTG CTGGTGCAGC GCTACAAGAG TGATATCAGG
TTTGCTGCTT TGATACCTGT CAGCGCCATG ACTGGCATCA TCAACGAGCA GAAAAGAGTC
AGCGCTAATC TCATCTCGGC GGGAAAATTA GGACGTCAAA AGAAAAACCA TGCGGTCAAT
GGTAATAGTC CAACGATGTG GCTGATGGAC AACCGCTCTC AAGAGGGACA TCAAGTCTCT
GATGTTCTAT GGCGATGCGA TGGAGTGGAG GACATCGCCA AGCGACCACT CACCGCTGAT
CTTATAGGGA TTATCGACGA CACCTTCAGT GATGTTGCTG GCCTCGATTT ATCGCTGTTA
GGTCGCGACG AAGCTTCACG TTATCAAGCC ACGGTATCTA GGGTAGCTAG AGACCCCAGC
GTTCGAAAAG CTGTCATTGA CCGTTGCAAC GGTCGTTGTG AGCGTCCTGG ATGTGGAGCA
AGCCGCTCCT ACTCTGGTTT TCTTGATGTA CACCACATAT TGGGTGTTGA GATAAGCGAT
CGCGTGGCCA ACTGTGTTGC CCTTTGCCCA AATTGCCACC GAGATGCACA TTTTTCAGCG
GATAGACAAA AGTTGAATGA CTCGTTGCTG ATCGTAGCTC AGAATCAGCC TGAGACCGTA
TATACGATTT AA
 
Protein sequence
MEPSSQKRAF RTPESIQAES ETRGMLKPFL EGRGFTEVTD RRKGHSQLIT ATSPEGLKFS 
ARVRLCWRWE DQPEKYSAAQ LRARLKDGDW DLTIAELVGR EATHGVTHAL LVQRYKSDIR
FAALIPVSAM TGIINEQKRV SANLISAGKL GRQKKNHAVN GNSPTMWLMD NRSQEGHQVS
DVLWRCDGVE DIAKRPLTAD LIGIIDDTFS DVAGLDLSLL GRDEASRYQA TVSRVARDPS
VRKAVIDRCN GRCERPGCGA SRSYSGFLDV HHILGVEISD RVANCVALCP NCHRDAHFSA
DRQKLNDSLL IVAQNQPETV YTI