Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4624 |
Symbol | |
ID | 3713644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5223413 |
End bp | 5224759 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350352 |
Protein GI | 77460845 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.977454 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGATAATTA ATTTTTTTGA TAGCCAAATA ATTATAGAAA CACAGCAGAT TCATGATGGG GAACAAATGG AAGGCTTTGC GGAATACAAC ACAAAACTTG AGCAGGTCTT CCACCTATGG AAAAAAGACG CTAATTCCGA GTTTTCCAAT CACAGCAATG TCACAGCAGC GAAAGTAAGA GAACTGATAG ACATTACGAC CTTACGCGAA TCTGGGGTAT TTTTTACTAG CGACGCTTTG GCGGAAAAAG CGATTAACTC TTTTAACTCG CCAATTAATG ATCGTGCTCT CGTCGTAGAC CCAACATGCG GATCAGGAAG TCTTTTGGTT GCCGCCTCAA GAAAGCTTTC CGTAATGCCT TTAGCCAGCG AAACCTTAAA AAAGTGGGGT AAACAGCTGT GCGGAATTGA TATATTCCCA GAATTTGTTT ATTGCACCAA GCTGAGACTA GTACTGGAAA GTTTAGTAAG AGGAGCTATA GCAGATAAAA ATTTATCTGA ACTTTTGAAC CTACTAACAA ATATTCACTC CGGCGACTGC TTAGACAACA CTGCCATCAT CGCTAAAGCC ACGCACCTTG CGCTAAACCC TCCTTACAAC AACTCGAAGA CAATAGCAAA ATACAGCTGG GCCAATGGAA AAATAAACAA CGCTGCAATT TATTATTATG AGCTATCACT TGCATTAAAG GATGGCTGTT CGATTTCAGC TATTTTGCCT GATGTTTTAA GAAGCGGAAG TAGGTTTGAA GCATGGCGCA ACACTATCGA GCCCGCACTA AAATCTTCCA AAGTGTCCGT CGAAGGCAGA TTCGACAAAC AAACTGATAT CGATATTTTC ATACTCAATG GATTAGTTGA CCGCAAAGGC TCAAACAAAG TTGAATGGCA GACAGCGGCA ACATTAGGTA TCGGGGACTG CCCTAAAATT CGAGATTTAT TTGAAGTTGC AGTTGGAGCC GTCGTGCCTT ACAGAGACCC TCATGAAGGT AAACTGTACG CATACATTCA TCCAAAAACA CTTCCACGGT GGGGAGAGAT AAGTAAGATC CCGGAAAACC GAAAATTTTT AGGTAGAGTT TTCCAACCCC CCTTCGTTGC TGTCAGAAGA ACATCTGGAC CTAGAGATAA ACATCGAGCC GTACCGACTC TAGTGCTAGG AAAAAGATTA GTCGCAGTCG AAAACCACCT AATCGTATTA ACCCCAAAAA ATGGGAGTCT AGATAGGTGC CGCAAACTTT CAGAATTACT CAAAGAAAAC CATATCAATG AGTTTCTGAA CAATAGGATT CGATGCCGCC ACTTAACAGT ATCGGCAATA TCAGAAATAC CATGGAGGTT TGAATGA
|
Protein sequence | MIINFFDSQI IIETQQIHDG EQMEGFAEYN TKLEQVFHLW KKDANSEFSN HSNVTAAKVR ELIDITTLRE SGVFFTSDAL AEKAINSFNS PINDRALVVD PTCGSGSLLV AASRKLSVMP LASETLKKWG KQLCGIDIFP EFVYCTKLRL VLESLVRGAI ADKNLSELLN LLTNIHSGDC LDNTAIIAKA THLALNPPYN NSKTIAKYSW ANGKINNAAI YYYELSLALK DGCSISAILP DVLRSGSRFE AWRNTIEPAL KSSKVSVEGR FDKQTDIDIF ILNGLVDRKG SNKVEWQTAA TLGIGDCPKI RDLFEVAVGA VVPYRDPHEG KLYAYIHPKT LPRWGEISKI PENRKFLGRV FQPPFVAVRR TSGPRDKHRA VPTLVLGKRL VAVENHLIVL TPKNGSLDRC RKLSELLKEN HINEFLNNRI RCRHLTVSAI SEIPWRFE
|
| |