Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4621 |
Symbol | tgt |
ID | 3713640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5219534 |
End bp | 5220667 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_350349 |
Protein GI | 77460842 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.559921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGCA CCTGTCGTAT GTCGTTCGAG CTGCTTGCCA CCGATGGCAA GGCCCGTCGT GGTCGTCTGA CCTTCCCCCG TGGCACCGTC GAGACCCCGG CCTTCATGCC GGTGGGCACC TACGGCACGG TCAAGGGCAT GTTGCCGCGT GACATCGTCG CCACCGGCGC GGAGATCATT CTGGGCAACA CTTTCCACCT GTGGCTGCGC CCGGGTACCG AAGTGATCAA GGAGCACGGC GACCTGCACG ATTTCATGCA GTGGAAAGGC CCGATCCTGA CCGACTCCGG CGGTTTCCAG GTGTTCAGCC TCGGCGCCAT GCGCAAGATC AAGGAGGAGG GCGTGACCTT CGCCTCCCCG GTCGACGGCT CGAAAGTGTT CATGGGCCCG GAAGAGTCGA TGCAGGTCCA GCGCGACCTG GGCTCGGACA TCGTGATGAT CTTCGACGAA TGCACCCCTT ACCCGGCTGA CGAAGACGTG GCCCGCGTGT CCATGGAACT GTCGCTGCGC TGGGCCCAGC GTTCGAAGAA TGCCCATGGC GACAACACGG CGGCACTGTT CGGCATCGTT CAGGGCGGCA TGCACCAGGA CCTGCGCATG CGCTCGCTGG AAGGCCTGGA CAAGATCGGC TTCGACGGCC TGGCCATCGG CGGTCTGTCG GTGGGCGAAC CCAAGCACGA AATGATCAAG GTGCTGGACT ATCTGCCGGG CATGATGCCG GCTGACAAAC CTCGTTACCT TATGGGCGTT GGCAAACCGG AAGATCTGGT TGAGGGTGTG CGCCGCGGTG TGGACATGTT CGATTGCGTG ATGCCAACCC GTAATGCCCG CAACGGGCAT CTGTTCATTG ATACAGGCGT GCTGAAGATC CGTAACGCGT TCCATCGCCA TGATGATTCG CCACTGGATC CGACCTGCGA TTGCTATACC TGCCAGAACT TCTCCCGCGC TTATCTGCAT CATCTGGACA AGTGCGGCGA AATGCTCGGC AGCATGCTCA ATACCATCCA CAATTTGCGC CATTATCAGG TGCTGATGGC TGGTTTGCGC GAGGCTATTC AACAGGGTAC ATTGGCCGCC TTTGTCGATG CCTTCTACGC CAAACGCGGG CTTCCCGTTC CGCCTTTGGA CTGA
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Protein sequence | MSRTCRMSFE LLATDGKARR GRLTFPRGTV ETPAFMPVGT YGTVKGMLPR DIVATGAEII LGNTFHLWLR PGTEVIKEHG DLHDFMQWKG PILTDSGGFQ VFSLGAMRKI KEEGVTFASP VDGSKVFMGP EESMQVQRDL GSDIVMIFDE CTPYPADEDV ARVSMELSLR WAQRSKNAHG DNTAALFGIV QGGMHQDLRM RSLEGLDKIG FDGLAIGGLS VGEPKHEMIK VLDYLPGMMP ADKPRYLMGV GKPEDLVEGV RRGVDMFDCV MPTRNARNGH LFIDTGVLKI RNAFHRHDDS PLDPTCDCYT CQNFSRAYLH HLDKCGEMLG SMLNTIHNLR HYQVLMAGLR EAIQQGTLAA FVDAFYAKRG LPVPPLD
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