Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4615 |
Symbol | |
ID | 3713634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5213793 |
End bp | 5214587 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | RNA methyltransferase TrmH, group 1 |
Protein accession | YP_350343 |
Protein GI | 77460836 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00452302 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGAGTC CGAGAGCGCC CGCCGTGCTG CAAAATATTC GTGTCGTCCT GGTCAACACC AGCCATCCGG GAAACATCGG CGGGACCGCG CGCGCCATGA AAAACATGGG CCTGTCGCGG CTGGTGCTGG TTGATCCGCG AGTCTTCCCG CATCACGAAG CCGATGCCCG TGCTTCCGGT GCCGGTGACA TCCTTGAAAA CGCGCAAGTC GTCGCCACTT TGGAAGACGC CTTGGTCGGT TGCAATCTGG TGCTCGGCAC CAGTGCCCGT GACCGGCGCA TTCCCTGGCC ATTGCTGGAT CCGCGCGAGT GCGGGACCAA AGTGGTCGAG GAGGCCGGGC AGGGCGCGGA AATCGCGCTG GTGTTCGGTC GTGAGGATTC CGGCCTGACC AATGACGAGC TGCAGCGATG TCACTATCAC GTGCACATCC CCTCCGATCC TGAATTCAGC TCGCTGAACC TCGGGGCGGC GGTGCAGGTG TTGAGTTATG AAGTGCGCAT GGCGTGGCTG GCTGCACAAG GCCAGCCGAC CAAGATCGAG AAGGAAGAAG TGGCCTCCGT GAAAAGCGCA GAGCTTGCGA CCATGGATGA GCTGGAGCGG TTCTATGAAC ACCTGGAGCA GACCCTGGTG GCCATCGAAT TCCTCGATCC GGAAAAGCCG CGGCACTTGA TGGCGCGCCT GCGCCGGTTG TATGGACGCA GCTCGGTCAG CCGGGCGGAA ATGAATATTT TGCGTGGCAT CCTCACGGAA ACCCAGAAAG CGGCCCGTGG CGAGCTCCTT AAGCGGAAGG ATTAA
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Protein sequence | MPSPRAPAVL QNIRVVLVNT SHPGNIGGTA RAMKNMGLSR LVLVDPRVFP HHEADARASG AGDILENAQV VATLEDALVG CNLVLGTSAR DRRIPWPLLD PRECGTKVVE EAGQGAEIAL VFGREDSGLT NDELQRCHYH VHIPSDPEFS SLNLGAAVQV LSYEVRMAWL AAQGQPTKIE KEEVASVKSA ELATMDELER FYEHLEQTLV AIEFLDPEKP RHLMARLRRL YGRSSVSRAE MNILRGILTE TQKAARGELL KRKD
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