Gene Pfl01_4615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4615 
Symbol 
ID3713634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5213793 
End bp5214587 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content61% 
IMG OID 
ProductRNA methyltransferase TrmH, group 1 
Protein accessionYP_350343 
Protein GI77460836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00452302 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGAGTC CGAGAGCGCC CGCCGTGCTG CAAAATATTC GTGTCGTCCT GGTCAACACC 
AGCCATCCGG GAAACATCGG CGGGACCGCG CGCGCCATGA AAAACATGGG CCTGTCGCGG
CTGGTGCTGG TTGATCCGCG AGTCTTCCCG CATCACGAAG CCGATGCCCG TGCTTCCGGT
GCCGGTGACA TCCTTGAAAA CGCGCAAGTC GTCGCCACTT TGGAAGACGC CTTGGTCGGT
TGCAATCTGG TGCTCGGCAC CAGTGCCCGT GACCGGCGCA TTCCCTGGCC ATTGCTGGAT
CCGCGCGAGT GCGGGACCAA AGTGGTCGAG GAGGCCGGGC AGGGCGCGGA AATCGCGCTG
GTGTTCGGTC GTGAGGATTC CGGCCTGACC AATGACGAGC TGCAGCGATG TCACTATCAC
GTGCACATCC CCTCCGATCC TGAATTCAGC TCGCTGAACC TCGGGGCGGC GGTGCAGGTG
TTGAGTTATG AAGTGCGCAT GGCGTGGCTG GCTGCACAAG GCCAGCCGAC CAAGATCGAG
AAGGAAGAAG TGGCCTCCGT GAAAAGCGCA GAGCTTGCGA CCATGGATGA GCTGGAGCGG
TTCTATGAAC ACCTGGAGCA GACCCTGGTG GCCATCGAAT TCCTCGATCC GGAAAAGCCG
CGGCACTTGA TGGCGCGCCT GCGCCGGTTG TATGGACGCA GCTCGGTCAG CCGGGCGGAA
ATGAATATTT TGCGTGGCAT CCTCACGGAA ACCCAGAAAG CGGCCCGTGG CGAGCTCCTT
AAGCGGAAGG ATTAA
 
Protein sequence
MPSPRAPAVL QNIRVVLVNT SHPGNIGGTA RAMKNMGLSR LVLVDPRVFP HHEADARASG 
AGDILENAQV VATLEDALVG CNLVLGTSAR DRRIPWPLLD PRECGTKVVE EAGQGAEIAL
VFGREDSGLT NDELQRCHYH VHIPSDPEFS SLNLGAAVQV LSYEVRMAWL AAQGQPTKIE
KEEVASVKSA ELATMDELER FYEHLEQTLV AIEFLDPEKP RHLMARLRRL YGRSSVSRAE
MNILRGILTE TQKAARGELL KRKD