Gene Pfl01_4613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4613 
Symbol 
ID3713632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5212354 
End bp5212845 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_350341 
Protein GI77460834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0156233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTGA CTACAAAAGG CCGATACGCC GTGACCGCCA TGCTTGACCT GGCGTTGCAC 
GCGCAACACG GGCCGGTGTC CCTGGCCGAT ATCTCCGAGC GCCAAGGCAT CTCCCTGTCC
TATCTCGAAC AGCTTTTCGC CAAGCTGCGC CGCAGTAACC TGGTTTCCAG TGTTCGCGGT
CCGGGCGGTG GCTACCAGTT GTCCCGCGAC ATGCAGGGCA TCCAGGTGGC TCAGGTGATC
GATGCGGTGA ACGAATCGGT CGATGCAACA AAATGCCAGG GCCAGGGCGA CTGCCACTCC
GGTGACACCT GCCTGACCCA TCACCTGTGG TGCGACCTGA GCCTGCAGAT TCACGAATTT
CTCAGCGGTA TCAGCTTGGC CGACCTCGTA ACTCGCCGTG AGGTGCAGGA AGTGGCCCAG
CGTCAGGATC AGCGTCGTTG CAATGGCAAG GCGCCGCGCC TGGACAAGAT TGAAGCGTCC
GCCGTCGAAT GA
 
Protein sequence
MRLTTKGRYA VTAMLDLALH AQHGPVSLAD ISERQGISLS YLEQLFAKLR RSNLVSSVRG 
PGGGYQLSRD MQGIQVAQVI DAVNESVDAT KCQGQGDCHS GDTCLTHHLW CDLSLQIHEF
LSGISLADLV TRREVQEVAQ RQDQRRCNGK APRLDKIEAS AVE