Gene Pfl01_4603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4603 
Symbol 
ID3713602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5204778 
End bp5205536 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content58% 
IMG OID 
ProductType IV pilus biogenesis protein PilF 
Protein accessionYP_350331 
Protein GI77460824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC GCTTTGCGCT GCTGTTGCTG TTGGCCAGCC TGTGTGCTGG TTGTGTCCTG 
TCGGGCGACT ACAACCCGAT GAAGACCAGC AAGGGCCGTG ACGAAGCGCG AGCTGCCTAC
GTGCAGCTGG GATTGGGATA CTTGCAGCAG GGCATGACCG AACGGGCCAA GGTTCCACTG
AAGAAAGCCT TGGAGCTGGA CGGGTCGGAT CCCGACGCCA ACGCCGCGCT GGGGCTGGTG
TTCCAGGCCG AAATGGAACC TGGGCTTGCT GACGAACACT TCCGCAAAGC CTTGTCCTCC
CGTCCCGCCG ATGCGCGCAT CCTCAACAAC TACGGCAGTT TTCTCTACGA AGAACAGCGT
TACAAGGAAG CCTACGAGCG TTTTGAACAG GCGGCCGCCG ATACCCTGTA TCCTGAGCGT
TCGCGGGTGT TCGAGAACCT CGGCATGACG GCGGCAAAGC TCGGTCAGCG TGATCTGGCG
CAGCAGCAGC TGGAAAAGGC GCTGCGTTTG AACCGCCAGC AGCCACGGGC ATTGCTGGAA
ATGGCTGAGT TGTCATTCGA AGACAGGCAT TATGTGCCCG CGCGTGACTA TTACGACCGT
TTCAGCCAGC TCTCCGAGCA AAATGCACGT AGTCTGTTGC TCGCCGTTCG GTTGGCAAAA
GTATTTGAAG ATCGCGACAA GGCCGCCAGT GCGGGCCTGC AATTAAAACG ACTCTATCCC
GGTACGCCGG AATATCAGCA ATACCTGTCG GAGCAATGA
 
Protein sequence
MSLRFALLLL LASLCAGCVL SGDYNPMKTS KGRDEARAAY VQLGLGYLQQ GMTERAKVPL 
KKALELDGSD PDANAALGLV FQAEMEPGLA DEHFRKALSS RPADARILNN YGSFLYEEQR
YKEAYERFEQ AAADTLYPER SRVFENLGMT AAKLGQRDLA QQQLEKALRL NRQQPRALLE
MAELSFEDRH YVPARDYYDR FSQLSEQNAR SLLLAVRLAK VFEDRDKAAS AGLQLKRLYP
GTPEYQQYLS EQ