Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4601 |
Symbol | ispG |
ID | 3713600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5202607 |
End bp | 5203716 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_350329 |
Protein GI | 77460822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGCG AATCTCCAAT CAAACGTCGC GAATCGCGCA AGATCTGGGT CGGTAACGTG CCCGTGGGCG GCGATGCCCC TATCGCTGTG CAGAGCATGA CCAACAGCGA CACCAATGAC GTCGCTGCCA CCGTCGCGCA GATCAACCGT CTGGAAGCCG CCGGCGTCGA CATCGTCCGC GTTTCGGTGC CGGACATGGA CGCCGCCGAG GCGTTCGGCA AGATCAAGCA ACTGGTCAAG GTGCCGTTGG TTGCCGACAT CCATTTCGAC TATAAGATCG CTCTGCGCGT GGCCGAACTG GGTGTGGACT GCCTGCGCAT CAACCCGGGC AACATCGGTC GCGAAGACCG CGTGCGTGCG GTGGTCGATG CCGCCCGTGA CCGCGGGATC CCGATCCGCA TCGGCGTCAA CGCCGGCTCG CTGGAAAAAG ACCTGCAAAA GAAATACGGC GAGCCGACGC CGGCCGCGCT GGTCGAGTCC GCCCTGCGTC ACGTCGAGCA TCTCGAACGC CTGAATTTCC AGGACTTCAA GGTCAGCGTG AAGGCTTCCG ACGTGTTCAT GGCCGTTGAA GCCTACCGTC TGCTGGCCAA GGAAATCGTT CAGCCACTGC ACCTGGGCAT CACCGAGGCC GGTGGATTGC GCTCTGGTAC AGTGAAATCC GCCGTGGGCC TAGGTATGCT GCTCGCCGAG GGGATTGGCG ATACTATCCG CATCTCGCTG GCGGCCGACC CGGTCGAGGA AGTGAAGGTC GGTTACGACA TTCTCAAGTC TTTGCATCTG CGTTCCCGTG GCATCAACTT CATCGCCTGC CCGAGCTGCT CGCGGCAGAA CTTCGATGTG GTCAAGACCA TGAACGAGCT GGAAGGGCGC CTTGAAGACC TGCTGGTGCC GCTGGATGTC GCGGTGATCG GTTGCGTGGT CAACGGCCCC GGCGAAGCCA AGGAAGCCCA TATCGGCTTG ACCGGCGGCA CGCCAAACCT GATTTACATC GACGGCAAGC CGTCGCAGAA ACTGACGAAT GACAATCTGG TGGACGAGCT GGAAAAGCTG ATCCGCGAGA AAGCGGCCGA GAAGGTCGAA GCTGACGCAG CGGTTATCGC GCGCGGCTGA
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Protein sequence | MHGESPIKRR ESRKIWVGNV PVGGDAPIAV QSMTNSDTND VAATVAQINR LEAAGVDIVR VSVPDMDAAE AFGKIKQLVK VPLVADIHFD YKIALRVAEL GVDCLRINPG NIGREDRVRA VVDAARDRGI PIRIGVNAGS LEKDLQKKYG EPTPAALVES ALRHVEHLER LNFQDFKVSV KASDVFMAVE AYRLLAKEIV QPLHLGITEA GGLRSGTVKS AVGLGMLLAE GIGDTIRISL AADPVEEVKV GYDILKSLHL RSRGINFIAC PSCSRQNFDV VKTMNELEGR LEDLLVPLDV AVIGCVVNGP GEAKEAHIGL TGGTPNLIYI DGKPSQKLTN DNLVDELEKL IREKAAEKVE ADAAVIARG
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