Gene Pfl01_4601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4601 
SymbolispG 
ID3713600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5202607 
End bp5203716 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_350329 
Protein GI77460822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGCG AATCTCCAAT CAAACGTCGC GAATCGCGCA AGATCTGGGT CGGTAACGTG 
CCCGTGGGCG GCGATGCCCC TATCGCTGTG CAGAGCATGA CCAACAGCGA CACCAATGAC
GTCGCTGCCA CCGTCGCGCA GATCAACCGT CTGGAAGCCG CCGGCGTCGA CATCGTCCGC
GTTTCGGTGC CGGACATGGA CGCCGCCGAG GCGTTCGGCA AGATCAAGCA ACTGGTCAAG
GTGCCGTTGG TTGCCGACAT CCATTTCGAC TATAAGATCG CTCTGCGCGT GGCCGAACTG
GGTGTGGACT GCCTGCGCAT CAACCCGGGC AACATCGGTC GCGAAGACCG CGTGCGTGCG
GTGGTCGATG CCGCCCGTGA CCGCGGGATC CCGATCCGCA TCGGCGTCAA CGCCGGCTCG
CTGGAAAAAG ACCTGCAAAA GAAATACGGC GAGCCGACGC CGGCCGCGCT GGTCGAGTCC
GCCCTGCGTC ACGTCGAGCA TCTCGAACGC CTGAATTTCC AGGACTTCAA GGTCAGCGTG
AAGGCTTCCG ACGTGTTCAT GGCCGTTGAA GCCTACCGTC TGCTGGCCAA GGAAATCGTT
CAGCCACTGC ACCTGGGCAT CACCGAGGCC GGTGGATTGC GCTCTGGTAC AGTGAAATCC
GCCGTGGGCC TAGGTATGCT GCTCGCCGAG GGGATTGGCG ATACTATCCG CATCTCGCTG
GCGGCCGACC CGGTCGAGGA AGTGAAGGTC GGTTACGACA TTCTCAAGTC TTTGCATCTG
CGTTCCCGTG GCATCAACTT CATCGCCTGC CCGAGCTGCT CGCGGCAGAA CTTCGATGTG
GTCAAGACCA TGAACGAGCT GGAAGGGCGC CTTGAAGACC TGCTGGTGCC GCTGGATGTC
GCGGTGATCG GTTGCGTGGT CAACGGCCCC GGCGAAGCCA AGGAAGCCCA TATCGGCTTG
ACCGGCGGCA CGCCAAACCT GATTTACATC GACGGCAAGC CGTCGCAGAA ACTGACGAAT
GACAATCTGG TGGACGAGCT GGAAAAGCTG ATCCGCGAGA AAGCGGCCGA GAAGGTCGAA
GCTGACGCAG CGGTTATCGC GCGCGGCTGA
 
Protein sequence
MHGESPIKRR ESRKIWVGNV PVGGDAPIAV QSMTNSDTND VAATVAQINR LEAAGVDIVR 
VSVPDMDAAE AFGKIKQLVK VPLVADIHFD YKIALRVAEL GVDCLRINPG NIGREDRVRA
VVDAARDRGI PIRIGVNAGS LEKDLQKKYG EPTPAALVES ALRHVEHLER LNFQDFKVSV
KASDVFMAVE AYRLLAKEIV QPLHLGITEA GGLRSGTVKS AVGLGMLLAE GIGDTIRISL
AADPVEEVKV GYDILKSLHL RSRGINFIAC PSCSRQNFDV VKTMNELEGR LEDLLVPLDV
AVIGCVVNGP GEAKEAHIGL TGGTPNLIYI DGKPSQKLTN DNLVDELEKL IREKAAEKVE
ADAAVIARG