Gene Pfl01_4586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4586 
Symbol 
ID3713547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5182618 
End bp5185761 
Gene Length3144 bp 
Protein Length1047 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350314 
Protein GI77460807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCA CACCCCTTGA GCGAGTGGAT CACCCTTCTC TTCCCTCTCA AGGAATAGAA 
CGAATGAACC CGACAGAACA ACGTCCGCTG CCCAACGACG CCGACAGAGC TGCACTCAAG
GTCATGGCCA CACAGGTGAT CACGGCGTGC CCGAGCCTGA ACGACACGGC CCGTCAGATT
GCCATTGAAA TGCTCGCCAG ACATGGCCTT ACCGGCCTCG ATCCCGATCA CGTCTATTAC
CATCGATTCA GAACTGCTCA GAGTCTTTCC ACATCATTCA CCGGTTGGCA GCATTATGGT
GAAAAACCCT ATGAAAGCCT GACCCTGACG CAACTGGTGA TACACCGGTT CCGCGCCACG
GATCAGGACA ACGCCGACTT GCTCGATGTA TACGGCGGGT TTTACAGCGC AGGGCCGGAC
ACCGAAAACT TCGATACAAC CAACGAAGTC CGGCTGCACG GTAACGAGGT ACTCGACGAC
TTCTGGAACA TCAACTTCAG CGAGCGTTAC CGCAACGAGC TGCAGTCGTT CTGGGATCAG
CACTCCCGTG AATTCCGCAC GCTGGCCAAA TGCAACTTTC TCGGCAAAGC CGTTGAAGCC
CGGGAATTCG GCCACCTGAA CGACGAGGAC TTCCAGACTG CAATCAGCGC GGTCATCGGC
CTGCTGAGCT GGCCAGTGAG CCTGCACAGT CTGCAAACCG AGTTCATCCC CGGCCATGGC
CTGCGGGTTT GCACGCTGGA TATCGACGGC CGTATGGCCA CCGATATCCT GCGCATCATT
GACTCGACAG GCCGGCAGAT CCTCTATGTG CCCGGCGACA ACCAACCATT TCATGTGCTG
GACACCCCCA CTGACATGCA CTGGTGGGCC TTGCAACAGC TGAACGAGAA AGCACCGCGC
GAACTGTTCC TCAAACACTT CTCGCTGGCT GACCGGCACT GGATGACCGA ACACATCAGT
GACCTGATGA ATCGACTGGT CAGCACCTGG GGGCATTCGG ATCATCATCT GATCAACCGT
AACGATCACA CGGTCACGGT GGATGCATTC AGCTGGCTGC GTGACTGTGC CCATAGCGCG
ATGTTCGCCG AAGCGGATCT TTCCCTGACC TCGAACGGTG ATCTGCGCAA GAAACTCTGG
ATCGGCTATC TGAGCGCTGG TCTGAAAGTC TTCGGCCCGA TGGCCGTGGT GGGCTGGCCT
GTTGCATTGC CGGTGATTGG CGCCAGCCTC GCCGACATGG GGCTGAACAT CGACAAGGCC
GTCAACGGCA AGACTTCCGC GGAGCGCAAG GAAGGTGTCC TGGGGGCCGT TTTCAGCGGT
ATCGATGCGC TGTTCAATAT TCCGTTTCTC AAGGGCACAG GCTCACTGGC GGAGCTCGAC
ATGCCGTCAG AAGCCATCGA AGCAAGCGAA CTGACAGAAG CCGATACAGC AGCGGAACTG
GAGCCAGAAC AACCGAATGA CATCGTGCCT GTTCTGCCAG AACAGCCCTC GGTCATATCC
GAACCAGTGC AAGCTTCACA AATCCCGCAA CGCTTTCAAT CCAACGCAAT CCTCGACGGT
CTTGATCCGG TTACGGAGCC GGGCAAATAT CGCGGCATCT ACAGACTCGA CACCGATCCT
CCCTACGCCA TCCAGATGAA CGACACGGCC TACTGCGTCC GTTACTTCAA CGACTCACTG
GGTGGCGGAT TCTGGGCGAT CATCGACCCG GCAAAACCGA ACCAGCTGAT TCACGCAATA
CCCGTGCGCT TGAACAGTGA AGGTCTGTGG GAGCGCATGA CTCAACTGGG ACTCAAGGGG
GGCGGTCAGT GTCTGGGCAG GCAATGCACC GTCGATGTGG CACTTGAACT TGATACACGC
GAACCCTCGC CCGCTGAGCC GGAGCCGTTG GTCACACAAC CTGGACCGTC AAACCCTGCG
CCCAGCGAGC CCCTGAACAT CCGACTGGTC AAGACGCCTT ACGCAGTCGA TCCGCAGCGG
GAGTTCGAAC TGAGGCGTTG GGCCCTGCAA TTACGTGAAA CCCATATTCA ACTGCGAATT
GGTCCTGACG GCGGGCTGAT CGCTCCGGAT CGCTATGCCC TGTATTTCGC CGATAAAGCC
CGCGCGCTTC GGATCTCCGC CAGGCGCTTC TACAAGAATC TGCCATGGGC AAACCTGCCG
CCACGCCCGC CGATACCTGC AATTACCTCT TCAATGACCT TCATGGAATT CGTAGCACAG
GCACTCAAGG AAGCGCCCGG TCTGGTGATC GGCGAAACGC CTGGCCGTAT CACCAGCATG
CGACTGATCA TTGAAAACAT GCCTGCTCTG GCGCGCGAAG GCGTCAAGAC GCTTTATGTG
CGCCGACTGC TCAGCGACTT TGCCCAGGCT GACCTGAATG CATACTTCAA GTCCGGCGTC
ATGTCCGAGG ACTTGCAGCA GTACCTGAGT CGCCTCGGTA CCGATCCGGC AGGGCGGTTC
GACGAACTGG CACTGGTCAA AAGTGCCCGA GAAAACGGTA TTCGAGTCCA GGCAACCGAT
TGCGCGGCTT CCTACAAAAG GCCCGATACG CTCGCACGGC CCGAGGAACA AATCATGACC
AATCACCTGA CAGCCGACAT CATGTTTATC GACAAGAACC TGAATGACGT CGGCAAGTGG
GTGGTACTGA CAGGCGTGGA AAACACCAAT ACGTTCAGGG GCGTTGCCGG CATCAGCGAA
CTGGAAGGCG GCATTGGTTT GCGCATTGAA GAAGTTGATC CGGGACTGGG CGAACGTGTC
TCACCGGACC CAGGTATCGA TATAGAACGG GGCCCGCATT CAGAAACGCT GGTACAACGC
GGGACTTTCG ATACCCATTA CGTCGACGCG CTGGTGCAAT TGGAAGCGGC GCCGGTCAGC
CGAAGCGAAC TGCAAATACA CCGACTGCTG TACCGCGCGG GCATGTATGT TTTCGAACGT
TCACAAGGTA CCTATCGGTT GTTCCACAGA AGTGTGAACG GCGAGATTGT ACAAACCCCT
GTCCAGACCT TCGCAGACGG GCGCTATTAC ATTGATCGCC CGTCCTGGGG TCCGGTACAC
CGCGTCCCCT ACGATAATCT TGAGCAGTTA TCCAGCGCAC TGAAACAGAT GGGGCTGCAA
CTGCAAAGCC GCCTTCCCCA CTGA
 
Protein sequence
MYRTPLERVD HPSLPSQGIE RMNPTEQRPL PNDADRAALK VMATQVITAC PSLNDTARQI 
AIEMLARHGL TGLDPDHVYY HRFRTAQSLS TSFTGWQHYG EKPYESLTLT QLVIHRFRAT
DQDNADLLDV YGGFYSAGPD TENFDTTNEV RLHGNEVLDD FWNINFSERY RNELQSFWDQ
HSREFRTLAK CNFLGKAVEA REFGHLNDED FQTAISAVIG LLSWPVSLHS LQTEFIPGHG
LRVCTLDIDG RMATDILRII DSTGRQILYV PGDNQPFHVL DTPTDMHWWA LQQLNEKAPR
ELFLKHFSLA DRHWMTEHIS DLMNRLVSTW GHSDHHLINR NDHTVTVDAF SWLRDCAHSA
MFAEADLSLT SNGDLRKKLW IGYLSAGLKV FGPMAVVGWP VALPVIGASL ADMGLNIDKA
VNGKTSAERK EGVLGAVFSG IDALFNIPFL KGTGSLAELD MPSEAIEASE LTEADTAAEL
EPEQPNDIVP VLPEQPSVIS EPVQASQIPQ RFQSNAILDG LDPVTEPGKY RGIYRLDTDP
PYAIQMNDTA YCVRYFNDSL GGGFWAIIDP AKPNQLIHAI PVRLNSEGLW ERMTQLGLKG
GGQCLGRQCT VDVALELDTR EPSPAEPEPL VTQPGPSNPA PSEPLNIRLV KTPYAVDPQR
EFELRRWALQ LRETHIQLRI GPDGGLIAPD RYALYFADKA RALRISARRF YKNLPWANLP
PRPPIPAITS SMTFMEFVAQ ALKEAPGLVI GETPGRITSM RLIIENMPAL AREGVKTLYV
RRLLSDFAQA DLNAYFKSGV MSEDLQQYLS RLGTDPAGRF DELALVKSAR ENGIRVQATD
CAASYKRPDT LARPEEQIMT NHLTADIMFI DKNLNDVGKW VVLTGVENTN TFRGVAGISE
LEGGIGLRIE EVDPGLGERV SPDPGIDIER GPHSETLVQR GTFDTHYVDA LVQLEAAPVS
RSELQIHRLL YRAGMYVFER SQGTYRLFHR SVNGEIVQTP VQTFADGRYY IDRPSWGPVH
RVPYDNLEQL SSALKQMGLQ LQSRLPH