Gene Pfl01_4585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4585 
Symbol 
ID3713546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5181107 
End bp5182489 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content63% 
IMG OID 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_350313 
Protein GI77460806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCT CCTTTACCCG TCGACAAATT CTCGGTGGCC TGGCCGGTCT TGCAGTGGTT 
GGCGCGGGAG CCGGTGGTGC GACGCGTTAC TGGTTGGGCA AGGTGGCGGA TGCCAACGCG
GGACACGACT ACGAACTGAT CGCTGCGCCT CTGGACGTCG AGCTGGTGCC GGGACACAAG
ACCGAGGCCT GGGCGTTCGG TCCGTCGGCG CCGGGCACCG AATTGCGTGT GCGTCAGGGC
GAGTGGCTGC GGGTGCGGTT CATCAACCAT CTGCCGGTGG CGACGACCAT TCACTGGCAC
GGCATCCGCC TGCCGCTGGA GATGGACGGC GTGCCCTATG TGTCGCAGTT GCCGGTGCTG
CCGGGCGAAT ACTTCGATTA CAAATTCCGT GTGCCGGACG CCGGCAGCTA CTGGTATCAC
CCGCACGTCA GCAGCAGCGA AGAACTCGGT CGCGGGCTGG TCGGGCCGTT GATTGTCGAG
GAGCGCGAGC CGACCGGGTT CAAGTACGAA AAGACCCTGA GCCTGAAAAA CTGGCACATC
GACGACGAGG GCAACTTCGT CGAGTTCAGC ATTCCCCGTG AAGCGGCCCG AGGCGGTACG
GCGGGGCGGC TGTCGACGAT CAACGGCGTT CCGACCCCGG TGATCGAGTT GCCGGCGGGG
CAGATCACCC GCGTACGCCT GCTCAACCTC GACAATACCC TGACCTATCG CATCAACATT
CCCGGCGTCG AAGCGCAGAT CTATGCGCTG GACGGCAACC CGGTCGAGCC GCGCCCATTG
GGCAAGGAAT ACTGGCTCGG CCCGGGCATG CGCATCTGCC TGGCGATCAA GGCACCGCCG
GCCGGTGAAG AACTGTCGCT GCGCAACGGC CCGGTTCGCC TGGGCACCCT GCGTTCAGTG
GCCAACACTG ACGCGCCGAC CGACTGGCCG AAAGCACTGC CGGCCAACCC GGTGGCCGAG
CCGGACCTGG CCAATGCCGA GAAACTCAAC TTCAATTTCG AATGGGTCGG TTCGGTGTCG
GTCAACGTCG ACAACGGCAA GCCACCGAGC CTGTGGCAGA TCAACGGCAA GGCTTGGGAC
ATCACCGACA AGACCTGCGC CGACCGGCCA ATCGCCAGCC TGAAACTCGG CCAGAGCTAT
ATTTTCGAAC TGAAGAACAT GACTCAGTAC CAGCACCCGA TCCACTTGCA CGGCATGAGT
TTCAAGGTGA TTGCGTCGAA CCGGCACAAG ATCGTGCCGT ACTTCACCGA CACCTACCTG
CTGGGCAAGA ACGAGCGCGC GCAAGTGGCG CTGGTGGCGG ATAACCCCGG GGTGTGGATG
TTCCACTGCC ATGTGATCGA CCACATGGAA ACCGGCCTGA TGGCCGCCAT CGAGGTGAAG
TGA
 
Protein sequence
MSISFTRRQI LGGLAGLAVV GAGAGGATRY WLGKVADANA GHDYELIAAP LDVELVPGHK 
TEAWAFGPSA PGTELRVRQG EWLRVRFINH LPVATTIHWH GIRLPLEMDG VPYVSQLPVL
PGEYFDYKFR VPDAGSYWYH PHVSSSEELG RGLVGPLIVE EREPTGFKYE KTLSLKNWHI
DDEGNFVEFS IPREAARGGT AGRLSTINGV PTPVIELPAG QITRVRLLNL DNTLTYRINI
PGVEAQIYAL DGNPVEPRPL GKEYWLGPGM RICLAIKAPP AGEELSLRNG PVRLGTLRSV
ANTDAPTDWP KALPANPVAE PDLANAEKLN FNFEWVGSVS VNVDNGKPPS LWQINGKAWD
ITDKTCADRP IASLKLGQSY IFELKNMTQY QHPIHLHGMS FKVIASNRHK IVPYFTDTYL
LGKNERAQVA LVADNPGVWM FHCHVIDHME TGLMAAIEVK