Gene Pfl01_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4580 
Symbol 
ID3713541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5177655 
End bp5178047 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350308 
Protein GI77460801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACC TTCGCCTGTT TGTCCCCCTG TCCCTCGCCC TGCTGGCCGC CTGCGCCACG 
CAACCGAAAA CCAACGTGAC CGTGGAGAAA CAAAGCGAAT GCCCGGTGCG CCTGACCAAC
GGGCAAAACC TGATCGTCAT GCTCCCGAGC AACCCCACTA CCGGCTACCG CTGGGCCATC
CAGGATTCTG CCGGTGGCGT ATTGCGCGCC CTCAGCCCCG AGGTCTACAG CAATCCGGAG
GATGCCGGCG TGGTCGGCGC GGCCGGGCTC TCGACCTGGC GCTTCCAGGC CTTCGCCACC
GGCACCGGGC GCCTGCGCCT GACTTCGCAG CAACCGTGGG CGCCGGAAGT GTTGCCGGTG
GAAACTTTTG ACTGCGCCAT TTCGGTGAAC TGA
 
Protein sequence
MSYLRLFVPL SLALLAACAT QPKTNVTVEK QSECPVRLTN GQNLIVMLPS NPTTGYRWAI 
QDSAGGVLRA LSPEVYSNPE DAGVVGAAGL STWRFQAFAT GTGRLRLTSQ QPWAPEVLPV
ETFDCAISVN