| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4579 |
|---|
| Symbol | |
|---|
| ID | 3713540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5175121 |
|---|
| End bp | 5177544 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | PIM1 peptidase |
|---|
| Protein accession | YP_350307 |
|---|
| Protein GI | 77460800 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACC AGCAAGAATT CCCCGAAAAC CCCGACGACA TCACCGAAAC CGACGCCGAA
CACATCGAAC ACCACGTCCC CGGCAAAGGC CTGGCCCTGC CCGGCCAGAA CCTGCCGGAC
AAGGTCTACA TCATCCCGAT CCACAACCGC CCGTTCTTCC CGGCCCAGGT CCTGCCGGTT
ATCGTCAACG AAGAGCCCTG GGCCGAAACC CTTGAACTGG TCAGCAAATC CGAACACCAC
TCCCTGGCCC TGTTCTTCAT GGACACACCC CAGGAAGACC CGCGCCACTT CGACACCAAG
GCGTTGCCGC AATACGGCAC CCTGGTCAAG GTGCATCACG CCAGCCGCGA AAACGGCAAA
CTGCAATTCG TCGCGCAGGG CCTGAGCCGC GTACGCATCA AGACCTGGCT CAAACACCAT
CGCCCGCCGT ATCTCGTTGA AGTCGAATAC CCGCACCAGC CCACCGAGCC GACCGACGAG
GTCAAGGCCT ACGGAATGGC GCTGATCAAC GCTATCAAGG AACTGCTGCC GCTCAACCCG
CTGTACAGCG AAGAGCTGAA GAACTACCTC AACCGCTTCA GCCCCAACGA TCCGTCGCCG
CTGACCGACT TCGCCGCCGC CCTCACATCG GCGACCGGCA ATGAGCTGCA GGAAGTGCTC
GACTGCGTGC CGATGCTCAA GCGCATGGAA AAAGTCCTGC CGATGCTGCG CAAGGAAGTC
GAAGTCGCGC GTCTGCAAAA AGAAATCTCC GCCGAAGTGA ACCGCAAGAT CGGCGAGCAT
CAGCGCGAGT TCTTCCTCAA GGAACAGCTC AAGGTCATCC AGCAAGAGCT GGGCCTGACC
AAGGACGACC GCAGCGCCGA CCTCGAGCAG TTCGAGCAGC GTCTGGAAGG CAAGGTCCTG
CCGACGCAGG TACAAAAGCG CCTCGAAGAA GAAATGAACA AACTGTCGAT CCTCGAAACC
GGATCGCCGG AGTACGCGGT CACCCGCAAC TACCTCGACT GGGCAACCTC GGTACCGTGG
GGCGTGTATG GCGAGGACAA ACTCGACCTC AAGCACGCGC GCAAGGTGCT GGACAAACAC
CACGCCGGCC TCGACGACAT CAAGGACCGG ATTCTCGAAT TCCTAGCGGT CGGTGCCTAT
AAAGGCGAGA TCAGTGGCTC CATCGTGCTG CTGGTGGGCC CGCCGGGCGT GGGTAAAACC
AGTGTCGGCA AATCCATCGC CGAATCCCTC GGCCGGCCGT TCTACCGCTT CAGCCTCGGC
GGCATGCGCG ACGAAGCCGA GATCAAGGGC CACCGCCGCA CCTACATCGG CGCGCAGCCG
GGCAAACTCG TGCAGGCGTT GAAAGACGTC GAAGTGATGA ACCCGGTGAT CATGCTCGAC
GAGATCGACA AGATGGGCCA GAGCTACCAG GGCGACCCCG CCTCGGCGCT GCTCGAAACC
CTCGACCCGG AACAGAACGT CGAATTCCTC GACCACTATC TGGACCTGCG GATGGACCTG
TCGAAAGTCC TGTTCGTCTG CACCGCCAAC ACCCTGGATT CGATTCCCGG CCCGTTGCTG
GACCGGATGG AAGTGATTCG CCTGTCGGGC TACATCACCG AAGAAAAAGT CGCCATCGCC
AAGCGTCACC TGTGGCCGAA ACTGCTGGAA AAGGCTGGCG TGTCCAAAGG CAGCCTGAGC
ATCAGCGACA CGGCGCTCAA GGCTCTGATC GACGGTTATG CCCGTGAAGC CGGCGTGCGC
CAGCTGGAAA AACAGATGGG CAAACTGGTG CGCAAAGCGG TGATGAAGCT GATCGACGAC
CCGAAAGCGG CGATCAAGAT CGGCCCGAAA GACCTCGAAG CGTCCCTCGG CCATCCGGTG
TTCCGCAACG AGCAAGTGCT GTCCGGCACT GGCGTGATCA CGGGACTTGC CTGGACCAGC
ATGGGCGGCG CGACACTGCC GATTGAAGCG ACGCGGATTC ACACGCTCAA TCGAGGTTTC
AAACTCACCG GGCAACTGGG CGATGTGATG AAGGAGTCGG CGGAGATCGC CTACAGCTAC
GTCAGCTCGC ACCTGAAACA GTTCGGCGGT GACGCGAAAT TCTTCGACGA AGCTTTCGTC
CACCTGCACG TACCGGAAGG CGCCACACCG AAAGACGGCC CAAGCGCCGG CGTGACCATG
GCCAGCGCCC TGCTCTCCCT CGCCCGTAAT CAGCCGCCGA AAAAAGGCGT GGCCATGACC
GGTGAACTGA CGCTGACCGG CCATGTGCTG CCGATTGGCG GGGTGCGCGA GAAGGTGATT
GCGGCGCGGC GGCAGAAGAT TTTCGAGTTG ATTCTGCCGG AACCCAATCG GGGTAACTTC
GAGGAACTGC CGGATTACTT GAAGGAAGGC ATTACCGTGC ACTTCGCCAA GAAGTTTTCG
GATGTGGCGA AGGTGCTTTT CTGA
|
|---|
| Protein sequence | MSDQQEFPEN PDDITETDAE HIEHHVPGKG LALPGQNLPD KVYIIPIHNR PFFPAQVLPV
IVNEEPWAET LELVSKSEHH SLALFFMDTP QEDPRHFDTK ALPQYGTLVK VHHASRENGK
LQFVAQGLSR VRIKTWLKHH RPPYLVEVEY PHQPTEPTDE VKAYGMALIN AIKELLPLNP
LYSEELKNYL NRFSPNDPSP LTDFAAALTS ATGNELQEVL DCVPMLKRME KVLPMLRKEV
EVARLQKEIS AEVNRKIGEH QREFFLKEQL KVIQQELGLT KDDRSADLEQ FEQRLEGKVL
PTQVQKRLEE EMNKLSILET GSPEYAVTRN YLDWATSVPW GVYGEDKLDL KHARKVLDKH
HAGLDDIKDR ILEFLAVGAY KGEISGSIVL LVGPPGVGKT SVGKSIAESL GRPFYRFSLG
GMRDEAEIKG HRRTYIGAQP GKLVQALKDV EVMNPVIMLD EIDKMGQSYQ GDPASALLET
LDPEQNVEFL DHYLDLRMDL SKVLFVCTAN TLDSIPGPLL DRMEVIRLSG YITEEKVAIA
KRHLWPKLLE KAGVSKGSLS ISDTALKALI DGYAREAGVR QLEKQMGKLV RKAVMKLIDD
PKAAIKIGPK DLEASLGHPV FRNEQVLSGT GVITGLAWTS MGGATLPIEA TRIHTLNRGF
KLTGQLGDVM KESAEIAYSY VSSHLKQFGG DAKFFDEAFV HLHVPEGATP KDGPSAGVTM
ASALLSLARN QPPKKGVAMT GELTLTGHVL PIGGVREKVI AARRQKIFEL ILPEPNRGNF
EELPDYLKEG ITVHFAKKFS DVAKVLF
|
|---|
| |