Gene Pfl01_4572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4572 
Symbol 
ID3713533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5167185 
End bp5167760 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID 
ProductPadR family transcriptional regulator 
Protein accessionYP_350300 
Protein GI77460793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACC ATCATTCCCC CCACCGCGAC CACGGCGACA GCCGTGACGG CTTCGAAAAA 
CGCCATGGTC GCGAACGCGG AGGTCGCGGC CCGCGGGTAT TCGCCCCGGG CGATCTGAAA
TTGCTGCTGC TGGCGCTGAT CGCCGAACAG CCGTGTCACG GCTATGACCT GATCCGCCAG
ATCGAAACCA TGTTCGACGG CGCCTACAGC CCCAGCCCCG GCGTGATCTA CCCGACCCTG
ACATTCCTCG AAGAGAGCGA AATGATCACC GGCGACGCCG AGGGCGGCAA AAAGCGCTAC
GCGGTGACCG ATGCCGGCCG CCAATCCCTC AGCGAACAGG CGGTGGCGCT GGACGGCGTG
CGCATGCGCA TCGACGTCAG CAAGCGCTCG CTTCGCGGCC ACGACCGGCC GCCGGAAATT
CATGAAGCGG TGCACAACCT GCGCCACGCC CTGCAAATGC ACCACGGGCG CTGGAGCCCG
GAAGAAATCC TGCGAGTGCG CGACCTGCTC AACGACACCG CCAAAGCCAT CGTCGACGGC
CCCGCCGTTC AATCTGCCCC GGAGAAAGCC GAATGA
 
Protein sequence
MRDHHSPHRD HGDSRDGFEK RHGRERGGRG PRVFAPGDLK LLLLALIAEQ PCHGYDLIRQ 
IETMFDGAYS PSPGVIYPTL TFLEESEMIT GDAEGGKKRY AVTDAGRQSL SEQAVALDGV
RMRIDVSKRS LRGHDRPPEI HEAVHNLRHA LQMHHGRWSP EEILRVRDLL NDTAKAIVDG
PAVQSAPEKA E