Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4570 |
Symbol | |
ID | 3713531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5163581 |
End bp | 5166151 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350298 |
Protein GI | 77460791 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCA GCCGGACTTT TTTCCGTTCG CAATCAGAGT CCGTGTTCAT GTTCCCGATG ACCCCCGTCG CGGCTGCGCT TGCGCTGTTG TTGTGTGCTG GCGCAGTAGT GGCTTCCGAA CCTGCCGGTA CGACGCCGCG TAGTTTGCTC GCGCAAGCCA AAGGCTTGCC GAAAGACTTC GAGGAGCACT TTTTTGATGT CCCTCTGGCT GTTCGGGTCG AACTCGACCA TCAGCCGTTG GGCGAAGCGA TGATTGTGCT GTCTCGTGAT GACCGCCTCA CCCTGCTCGA ATTCACCGAC ACCAGCGAGA ACCGTTTCGG CGCTGTCGAA CGGGAAAAGT GGGCGAGCTA TCTCAAGCCC GGCGTGGCGC TGGGATCATG CGCCGGTCAA TGCCCCGAGC AAATGCTGGC GGTGCATTAC AACCTGGAAA ACTCCCTCGT CTCCATCCTG ACCGAGAATG CCGAACGCGA CGTCGAAGCC AAGCGTTTCT ACGACCAGCC GGAAAATGGC AGCACCGGTC TGATCGTGCG TAACCAGCTC AACCTCAACG GCGGCCAGGA GCAGGATCTG GGTGGGCGTT TCGGCCTGGA GGCCAACGGC AGCCTGGGCA ACTGGAGCCA GACGTTCAAC ATGCAGCTGG CCCGTCTCGG TGGTCCGGAC GACAAGCTCT ATCACGCCGT CTACGAGCTG CATACCCAGC GCGAGCTGCA AGGCAGTTTT CTGCGACTGG GCTATTTCAC CCCCACGTCG GAAGGCTTGA CCCGTCAGCT GCGCTCATTC GGCACCAGCC CCGATACCAC CGTGGGCTTG ATGTACGGCA GTTCCGACAG CCTGGCGATC GACCTGCAAA ACCCGAGCGT CTACCCGATC TATGTCACCG CCAACCGTCA GGCCTCGGTG GAAATCTACC GCGACGGTCT GCTCATCAAC ACCCAGTCGG TGCCCGCCGG TTTGCAGACC CTCGATACCC GGCCCTTGCC CGGCGGGATT TATGAAGTGG AAGTGCGCCT GATCGAGGAC GGTCAGACGA CATCGAGCAC CCAGGAGCTG GTCTACAAGC CGAGCAACTG GCGTAACCCC GACGAGCGCT GGCGCTACAA CCTGTTTGCC GGTCAGGAAA CCAAACTGCT CAGCAACTGG GACAAGCAGG CCAGTGGCGA CGCCACCGCA GGGGCTTCGC TCAACTATTT GCTGCACCCG CGGGTCGTCC TCGGGCTGTC GGCGCGTCAG GTTCGGGAAA AGCTGCAATA CGGCACCTCC ATCGACTGGA CCCTGGCCAA CAGCACCAGT CTGTACGCCA ACTTCTACCA GACCGAAGAC CATGGCACCG GCATCGATCT GCAGGGCCTC TACAACTATG GCGCCGGCAG TCTGGTGATC AGTCACAACC GCAGCTGGCT GGACACCACC AATATTTACG ACACGCTGCC GGACGGCACG CGCATCCGTC AGCGCAACGT GTTCACCGGG CAGACCAGCA ATTCCTCTCT GGCCCTGAAC CATCGCGTCA GCCGCAACAG TTCGCTAAAT GCCCGGGTTG CCCACAGTGA AGGTAACGTC GAAGGCATTG GCGTCGACCT GGGCTGGACC CAGCGCACGA CGGTGTTTGG CAGTGATTCG AACTGGCGGC TGTCGGTGTT CGACCGGCCG GGCAGTTACA GCAGTGGCGA TGCGCGCAAC CGGGGTATTG ATCTGAGCCT GAACGTGGCG CTCGGCGGAC CGGGGCAGCA GATTTCCGGC AGCATCGGCA CGCGCACCGC ACGGGACGGC AGCCGGGACA ACAACGCTTC GCTGGGTTAC CGCAAAACCC TTGAGGATCA CGTGCTGCAA AGCGTGGCGG CGACCATGAT CACCGACACC TACGGAATCG GCTTGAACGG TCAGGCTTAT TTCAGCACCG ACACGGTCAA CGGCGATGGT TTCGTCCAGC GCTCGTCCTA TAACGGCAAT TACACCGGTG GCCTGAACCT CGACAGCACT GTGGCCATCG GTAGGCAGCA GATCGTGATG ACCAGCCAGC ACCAGGGGCG CGGAGCGGGA ATGATCGTGG ATGTCGAGTC CGATATCGAC GGCATCGCTT TGCGCGCCGA CGACTTGAGT GGTGGCAGCG CATCCCTGCG GCCGGGACGC AACTTCATTC CCCTTACGGC CTACAAGAAC AGCTCGGTCA GCTTCGACTT CGAAGGCAAC GACGTGCCGG CAGCGTCCAT CGAACCGCCG CGCGCCCGTT ATCACTTGAA CAAGGGCGGC GTGGAGTATC GCAAGGTGAA AGTGATGAAA ACCCTGACCG TGCTCGGCCG TCTGCTCGAC CCCCAGGGGC GACCGCTCAA GGGGCACCAC GTCATCAATC ACGCCAGCCG CGGGGTGAGC GAAGTGGACG GGTTCTTCTC CATGGAAATG AACGAGGGTT CTCCGACGCT GGAGGTTCGC TACGCGGACC AGTTGCTGTG CCAGTTCCGC CTCGATCCGC AACAGGGGCG AGTGGAGAAC AACGTGCTGA TGATTGGTGA CCTGCGTTGC AGCCCCGACA CCCTGGCCGA TGCCACATTC ACCGAACAGA AGGCGGGCTG A
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Protein sequence | MSVSRTFFRS QSESVFMFPM TPVAAALALL LCAGAVVASE PAGTTPRSLL AQAKGLPKDF EEHFFDVPLA VRVELDHQPL GEAMIVLSRD DRLTLLEFTD TSENRFGAVE REKWASYLKP GVALGSCAGQ CPEQMLAVHY NLENSLVSIL TENAERDVEA KRFYDQPENG STGLIVRNQL NLNGGQEQDL GGRFGLEANG SLGNWSQTFN MQLARLGGPD DKLYHAVYEL HTQRELQGSF LRLGYFTPTS EGLTRQLRSF GTSPDTTVGL MYGSSDSLAI DLQNPSVYPI YVTANRQASV EIYRDGLLIN TQSVPAGLQT LDTRPLPGGI YEVEVRLIED GQTTSSTQEL VYKPSNWRNP DERWRYNLFA GQETKLLSNW DKQASGDATA GASLNYLLHP RVVLGLSARQ VREKLQYGTS IDWTLANSTS LYANFYQTED HGTGIDLQGL YNYGAGSLVI SHNRSWLDTT NIYDTLPDGT RIRQRNVFTG QTSNSSLALN HRVSRNSSLN ARVAHSEGNV EGIGVDLGWT QRTTVFGSDS NWRLSVFDRP GSYSSGDARN RGIDLSLNVA LGGPGQQISG SIGTRTARDG SRDNNASLGY RKTLEDHVLQ SVAATMITDT YGIGLNGQAY FSTDTVNGDG FVQRSSYNGN YTGGLNLDST VAIGRQQIVM TSQHQGRGAG MIVDVESDID GIALRADDLS GGSASLRPGR NFIPLTAYKN SSVSFDFEGN DVPAASIEPP RARYHLNKGG VEYRKVKVMK TLTVLGRLLD PQGRPLKGHH VINHASRGVS EVDGFFSMEM NEGSPTLEVR YADQLLCQFR LDPQQGRVEN NVLMIGDLRC SPDTLADATF TEQKAG
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