Gene Pfl01_4570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4570 
Symbol 
ID3713531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5163581 
End bp5166151 
Gene Length2571 bp 
Protein Length856 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350298 
Protein GI77460791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA GCCGGACTTT TTTCCGTTCG CAATCAGAGT CCGTGTTCAT GTTCCCGATG 
ACCCCCGTCG CGGCTGCGCT TGCGCTGTTG TTGTGTGCTG GCGCAGTAGT GGCTTCCGAA
CCTGCCGGTA CGACGCCGCG TAGTTTGCTC GCGCAAGCCA AAGGCTTGCC GAAAGACTTC
GAGGAGCACT TTTTTGATGT CCCTCTGGCT GTTCGGGTCG AACTCGACCA TCAGCCGTTG
GGCGAAGCGA TGATTGTGCT GTCTCGTGAT GACCGCCTCA CCCTGCTCGA ATTCACCGAC
ACCAGCGAGA ACCGTTTCGG CGCTGTCGAA CGGGAAAAGT GGGCGAGCTA TCTCAAGCCC
GGCGTGGCGC TGGGATCATG CGCCGGTCAA TGCCCCGAGC AAATGCTGGC GGTGCATTAC
AACCTGGAAA ACTCCCTCGT CTCCATCCTG ACCGAGAATG CCGAACGCGA CGTCGAAGCC
AAGCGTTTCT ACGACCAGCC GGAAAATGGC AGCACCGGTC TGATCGTGCG TAACCAGCTC
AACCTCAACG GCGGCCAGGA GCAGGATCTG GGTGGGCGTT TCGGCCTGGA GGCCAACGGC
AGCCTGGGCA ACTGGAGCCA GACGTTCAAC ATGCAGCTGG CCCGTCTCGG TGGTCCGGAC
GACAAGCTCT ATCACGCCGT CTACGAGCTG CATACCCAGC GCGAGCTGCA AGGCAGTTTT
CTGCGACTGG GCTATTTCAC CCCCACGTCG GAAGGCTTGA CCCGTCAGCT GCGCTCATTC
GGCACCAGCC CCGATACCAC CGTGGGCTTG ATGTACGGCA GTTCCGACAG CCTGGCGATC
GACCTGCAAA ACCCGAGCGT CTACCCGATC TATGTCACCG CCAACCGTCA GGCCTCGGTG
GAAATCTACC GCGACGGTCT GCTCATCAAC ACCCAGTCGG TGCCCGCCGG TTTGCAGACC
CTCGATACCC GGCCCTTGCC CGGCGGGATT TATGAAGTGG AAGTGCGCCT GATCGAGGAC
GGTCAGACGA CATCGAGCAC CCAGGAGCTG GTCTACAAGC CGAGCAACTG GCGTAACCCC
GACGAGCGCT GGCGCTACAA CCTGTTTGCC GGTCAGGAAA CCAAACTGCT CAGCAACTGG
GACAAGCAGG CCAGTGGCGA CGCCACCGCA GGGGCTTCGC TCAACTATTT GCTGCACCCG
CGGGTCGTCC TCGGGCTGTC GGCGCGTCAG GTTCGGGAAA AGCTGCAATA CGGCACCTCC
ATCGACTGGA CCCTGGCCAA CAGCACCAGT CTGTACGCCA ACTTCTACCA GACCGAAGAC
CATGGCACCG GCATCGATCT GCAGGGCCTC TACAACTATG GCGCCGGCAG TCTGGTGATC
AGTCACAACC GCAGCTGGCT GGACACCACC AATATTTACG ACACGCTGCC GGACGGCACG
CGCATCCGTC AGCGCAACGT GTTCACCGGG CAGACCAGCA ATTCCTCTCT GGCCCTGAAC
CATCGCGTCA GCCGCAACAG TTCGCTAAAT GCCCGGGTTG CCCACAGTGA AGGTAACGTC
GAAGGCATTG GCGTCGACCT GGGCTGGACC CAGCGCACGA CGGTGTTTGG CAGTGATTCG
AACTGGCGGC TGTCGGTGTT CGACCGGCCG GGCAGTTACA GCAGTGGCGA TGCGCGCAAC
CGGGGTATTG ATCTGAGCCT GAACGTGGCG CTCGGCGGAC CGGGGCAGCA GATTTCCGGC
AGCATCGGCA CGCGCACCGC ACGGGACGGC AGCCGGGACA ACAACGCTTC GCTGGGTTAC
CGCAAAACCC TTGAGGATCA CGTGCTGCAA AGCGTGGCGG CGACCATGAT CACCGACACC
TACGGAATCG GCTTGAACGG TCAGGCTTAT TTCAGCACCG ACACGGTCAA CGGCGATGGT
TTCGTCCAGC GCTCGTCCTA TAACGGCAAT TACACCGGTG GCCTGAACCT CGACAGCACT
GTGGCCATCG GTAGGCAGCA GATCGTGATG ACCAGCCAGC ACCAGGGGCG CGGAGCGGGA
ATGATCGTGG ATGTCGAGTC CGATATCGAC GGCATCGCTT TGCGCGCCGA CGACTTGAGT
GGTGGCAGCG CATCCCTGCG GCCGGGACGC AACTTCATTC CCCTTACGGC CTACAAGAAC
AGCTCGGTCA GCTTCGACTT CGAAGGCAAC GACGTGCCGG CAGCGTCCAT CGAACCGCCG
CGCGCCCGTT ATCACTTGAA CAAGGGCGGC GTGGAGTATC GCAAGGTGAA AGTGATGAAA
ACCCTGACCG TGCTCGGCCG TCTGCTCGAC CCCCAGGGGC GACCGCTCAA GGGGCACCAC
GTCATCAATC ACGCCAGCCG CGGGGTGAGC GAAGTGGACG GGTTCTTCTC CATGGAAATG
AACGAGGGTT CTCCGACGCT GGAGGTTCGC TACGCGGACC AGTTGCTGTG CCAGTTCCGC
CTCGATCCGC AACAGGGGCG AGTGGAGAAC AACGTGCTGA TGATTGGTGA CCTGCGTTGC
AGCCCCGACA CCCTGGCCGA TGCCACATTC ACCGAACAGA AGGCGGGCTG A
 
Protein sequence
MSVSRTFFRS QSESVFMFPM TPVAAALALL LCAGAVVASE PAGTTPRSLL AQAKGLPKDF 
EEHFFDVPLA VRVELDHQPL GEAMIVLSRD DRLTLLEFTD TSENRFGAVE REKWASYLKP
GVALGSCAGQ CPEQMLAVHY NLENSLVSIL TENAERDVEA KRFYDQPENG STGLIVRNQL
NLNGGQEQDL GGRFGLEANG SLGNWSQTFN MQLARLGGPD DKLYHAVYEL HTQRELQGSF
LRLGYFTPTS EGLTRQLRSF GTSPDTTVGL MYGSSDSLAI DLQNPSVYPI YVTANRQASV
EIYRDGLLIN TQSVPAGLQT LDTRPLPGGI YEVEVRLIED GQTTSSTQEL VYKPSNWRNP
DERWRYNLFA GQETKLLSNW DKQASGDATA GASLNYLLHP RVVLGLSARQ VREKLQYGTS
IDWTLANSTS LYANFYQTED HGTGIDLQGL YNYGAGSLVI SHNRSWLDTT NIYDTLPDGT
RIRQRNVFTG QTSNSSLALN HRVSRNSSLN ARVAHSEGNV EGIGVDLGWT QRTTVFGSDS
NWRLSVFDRP GSYSSGDARN RGIDLSLNVA LGGPGQQISG SIGTRTARDG SRDNNASLGY
RKTLEDHVLQ SVAATMITDT YGIGLNGQAY FSTDTVNGDG FVQRSSYNGN YTGGLNLDST
VAIGRQQIVM TSQHQGRGAG MIVDVESDID GIALRADDLS GGSASLRPGR NFIPLTAYKN
SSVSFDFEGN DVPAASIEPP RARYHLNKGG VEYRKVKVMK TLTVLGRLLD PQGRPLKGHH
VINHASRGVS EVDGFFSMEM NEGSPTLEVR YADQLLCQFR LDPQQGRVEN NVLMIGDLRC
SPDTLADATF TEQKAG