Gene Pfl01_4564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4564 
Symbol 
ID3713525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5151354 
End bp5154443 
Gene Length3090 bp 
Protein Length1029 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350292 
Protein GI77460785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTCCGA CTGAACGTGT GGATGAAGCG CCTGTACCTG AGAAACCCCG TCGCAACCGG 
CATGGGTGGA AGGCTTTCTG GCTCCTGTTG GTGATCATCG CGATTGTCGT GGGCCTGGCC
GCGATGAAGG AAATGCGCAC CTCGCGTTTT CAGTCCCGCG AGGTCAGCCA GTACGCCGCC
AAACTCAAGT ACGAATTGCA ACCGGGGCCC AGCGAAGCGA TCCGCTATCC GGGCAACGGG
CCGTTCGATC TGCGTCTGGG CTACAGCTCG CTGGACGAGT TCCTGCCGCG GCTGATCAAG
CGCAACTACG TGATCACCGA GCAGACGCGC TTCTCCCCGG CCCTGCTCAA CTACACCGAC
AAGGGCCTGT TCGTGCCCTA TTCCGAAAAG ATCCAGGCCG GGCTGTCGAT CACCGATTGC
CGCGCCGCGC CGCTGTATCA GTACAACTAT CCGCAGCAGC TGTACGCGAG TTTCGATTCG
ATCCCGCCGG TGGTGGTCAA CAGCCTGCTG TTCATCGAAA ACCGTTTTCT ACTTGATCCA
AAACAACCGA TGGCCAACCC GGCGGTGGAC TGGCCGCGCT TCGGCATGGC CGCGTGGTCG
CAAGTTGCCA AGCTGCTGCA CTTGCCGGGG CAGTCGGCCG GTGGCAGTAC CCTGGCCACG
CAACTGGAGA AATACCGCCA TTCACCCGAT GGCCTGACGG TGTCCGGCGC GGAGAAAATC
CGCCAGATGA TTTCCGCCAG CGTGCGCGCC TATCAGGGTG GCCCGGACAC CTTGCCGGCG
CGGCAGAACA TCGTTCGCGA TTATCTCAAC AGCGTGCCGC TGTCGGCGGT GCCGGGGCAT
GGTGAGGTAC ATGGCATGGC CGAGGGCCTG CGGGTCTGGT ATGGCGCCGA CTTCAACGAG
GCCAACCGAA CACTCGCCAG TACCGCCACC GATCCGAAAT CCATGGCGGA CAAGGGCCTG
GCCCTGCGCG AGATGCTCTC GCTGATGATC GCCCAGCGCC GCCCTTCGCA TTACCTGACC
AAGGGTCGTG AAGAACTGGT CGAACTGACC AACAGCCACT TGCGCCTGCT CAAGCAGAAC
GGCGTGATCG ACGCTGCCCT GGCCGATGCC GCGCTGGCCA GCACCATCAG CTACCGCGAC
TGGCAGACCC AGCCGACGAT TCAGCCGATC GAAACCAACA AGGGCATCAG TGTCGCCCGC
AGCCGGCTGG CGTCGATGCT CAACCGTCCG CTGTACGACC TTGACCGCCT CGACTTGTCC
GCTACCAGCA CCCTGCAAGG CGAGCTGCAA ACCCAGGCCA CTGCATACCT GAAACGACTG
GCCGACCCGG CCTATGCCGC TGAAATCGGC CTGATGGGCG AACGCCTCCT GACGCCCACC
AGCACCACTC AGGTGCGCTA CAGCTTCACA TTGTTCGAGC TGACCCCGGA CGGTTCACGC
GTGCGGGTGC AGACCGACAG CACTGATCAG CCGTTCGACA TCAATGAGGG CAGCAAACTG
GAACTGGGCT CCACCGCCAA GATGCGGGTG CTCACCACCT ACCTGCAAAT CATCGCGGAG
CTGCATGACA AGTACGGCGC CATGAGCGTG CCGGAACTGA AGAAAGTCGA GGTACCGGAT
CAGGATCGCC TGAGCCAGTG GGTGATCGAC TACCTGATCC AGAACAAGGA TCACGACCTG
TCGAAGATGC TCTCCTCCGC CCTCGACCGC AAATACTCGG CCAGTCCTGG CGAGGCGTTT
TTCACCGGTG GCGGCCTGCA TGTGTTCCAT AACTTTCGCA AGGAAGACAA CGGTCGCCTG
CCGACGCTGC GCGATGCCCT GCGCGAATCG ATCAACCTGC CGTTCATTCG CCTGATGCGC
GATCTGGTGC GCTACACCAC CTACTCAGGT CCCAACAACA GCGCCGAACT GCTCAAGGAC
GACCGCGACC CAAGACGTCA GGAATACCTC GCCTCGTTTG CCGACCGAGA GGGCACCTCG
TTCCTGCTCA AGTTCTGGAA AAAGTACCGG AACAAGGACA CCCAGGCCCG GCTCGACACC
TTCCTCGACA GCATGCGCCC GACCCCGATC CGCATGGCCG CCGTGCACCG TTACCTGCTG
CCCAACGCCA GCCAGGAAGA CTTCAACACC TTTGTGCGCT CGCACCTCAA GGGCGTCAAA
ATCACCGAAA AACTCACCGA CGAACGCCTG GAACGGCTGT ATCTGGCCTA CGGTCCCGGC
ACCTACGACC TACCGGATCA GGGCTTCATC GCTAAGGTTC ACCCGCTGGA CCTGTGGATG
ATCGGCTACC TGCTCAACCA CCCCGACGCG ACCTTCAAGG ACATCGTCAA GGCCAGCCAG
TTCGAGCGTC AGGAAGTCTA CAGCTGGCTG TTCAAGAGCA GGCACAAGGG TGCCCGTGAC
AGTCGCATCC GCACGATGCT GGAGATCGAG GCGTTCCTCG AGATCCATCA GCGCTGGCAG
AAAGTCGGCT ATCCGTTCGA TCACCTGGTG CCGTCGCTGG CCACCGCCAT CGGCAGCTCC
GGCGACCGCC CCGCGGCGTT GGCCGAACTG ATCGGCACCA TCCTCAACGA CGGTGTGCGC
ATGCCGACCC TGCGCATCGA CAGTCTGCAC TTTGCCGCCG GCACGCCTTA CGAAACGAAA
CTGGTCAATG ATCCTCACGT CGGCAAACGG GTGATGCCGT CCGAAGTGGC CACGGCGATG
CGTGAAGCGC TGTCGCAGGT GGTGGACTCG GGAACGGCCA AACGTGTTTC CGGCAGTTTC
AAACTGGCTG ATGGAACACC GCTGACCATG GGTGGAAAAA CCGGTACCGG TGACAACCGG
ATCGAGGCCA TCGGCTCCGG CGGGCGAATT CTCAGCTCGA AATCGATCAA CCGCACGGCG
ACCTTCGTGT TCTACATCGG CGACCACCAT TTCGGCACGC TCACCGCGTT CGTGCCGGGG
CGTTCGGCGG AGAACTTCAA GTTCACCTCG GCCTTGCCGG TACAGGTCCT CAAGGGCATG
GCGCCGATTC TGATGCCTTA CCTGCAACCG GGCAGCGACT CACAGTGCCG TGCCACGCAG
ACAACGACCG TGGCCCTGGC TTCAGATTGA
 
Protein sequence
MVPTERVDEA PVPEKPRRNR HGWKAFWLLL VIIAIVVGLA AMKEMRTSRF QSREVSQYAA 
KLKYELQPGP SEAIRYPGNG PFDLRLGYSS LDEFLPRLIK RNYVITEQTR FSPALLNYTD
KGLFVPYSEK IQAGLSITDC RAAPLYQYNY PQQLYASFDS IPPVVVNSLL FIENRFLLDP
KQPMANPAVD WPRFGMAAWS QVAKLLHLPG QSAGGSTLAT QLEKYRHSPD GLTVSGAEKI
RQMISASVRA YQGGPDTLPA RQNIVRDYLN SVPLSAVPGH GEVHGMAEGL RVWYGADFNE
ANRTLASTAT DPKSMADKGL ALREMLSLMI AQRRPSHYLT KGREELVELT NSHLRLLKQN
GVIDAALADA ALASTISYRD WQTQPTIQPI ETNKGISVAR SRLASMLNRP LYDLDRLDLS
ATSTLQGELQ TQATAYLKRL ADPAYAAEIG LMGERLLTPT STTQVRYSFT LFELTPDGSR
VRVQTDSTDQ PFDINEGSKL ELGSTAKMRV LTTYLQIIAE LHDKYGAMSV PELKKVEVPD
QDRLSQWVID YLIQNKDHDL SKMLSSALDR KYSASPGEAF FTGGGLHVFH NFRKEDNGRL
PTLRDALRES INLPFIRLMR DLVRYTTYSG PNNSAELLKD DRDPRRQEYL ASFADREGTS
FLLKFWKKYR NKDTQARLDT FLDSMRPTPI RMAAVHRYLL PNASQEDFNT FVRSHLKGVK
ITEKLTDERL ERLYLAYGPG TYDLPDQGFI AKVHPLDLWM IGYLLNHPDA TFKDIVKASQ
FERQEVYSWL FKSRHKGARD SRIRTMLEIE AFLEIHQRWQ KVGYPFDHLV PSLATAIGSS
GDRPAALAEL IGTILNDGVR MPTLRIDSLH FAAGTPYETK LVNDPHVGKR VMPSEVATAM
REALSQVVDS GTAKRVSGSF KLADGTPLTM GGKTGTGDNR IEAIGSGGRI LSSKSINRTA
TFVFYIGDHH FGTLTAFVPG RSAENFKFTS ALPVQVLKGM APILMPYLQP GSDSQCRATQ
TTTVALASD