Gene Pfl01_4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4538 
Symbol 
ID3712576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5112659 
End bp5113393 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content59% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_350266 
Protein GI77460759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.247485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTA TCAAGAACAT CAACAAGTGG TATGGGGACT TCCAGGTGCT GACCGATTGC 
AGCACCGAGG TCAAAAAGGG TGAAGTGATC GTGGTCTGCG GTCCGTCCGG TTCGGGCAAG
TCGACCCTGA TCAAGTGCGT CAACGCACTG GAGCCGTTCC AGAAAGGCGA CATCGTGGTC
GACGGCACGT CGATTGCCGA TCCGAAGACC AACCTGCCGA AACTGCGCTC GCGCGTCGGC
ATGGTGTTCC AGCATTTCGA ACTGTTCCCG CACCTGACCA TCACCGAAAA CCTGACCATC
GCGCAGATCA AGGTGCTGGG CCGCAGCAAG GAAGAAGCCA CCAAGAAAGG CCTGCAACTG
CTCGAGCGCG TCGGCCTGTC GGCTCATGCC CACAAACATC CGGGCCAGTT GTCCGGCGGT
CAGCAACAGC GTGTGGCGAT CGCCCGTGCG CTGGCGATGG ACCCGATCGT CATGCTGTTC
GACGAACCGA CCTCGGCGCT GGACCCGGAA ATGGTCAACG AAGTGCTCGA CGTAATGGTG
CAACTGGCCC ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCCCGT
AAAGTGGCCG ACCGCGTGAT CTTCATGGAC GCCGGCAAGA TCATCGAAGA CTGCAAGAAA
GAAGAGTTCT TTGGCGACAT CAGCCAACGC TCCGAACGCG CGCAGCATTT CCTCGAGAAA
ATCCTGCAGC ACTAA
 
Protein sequence
MISIKNINKW YGDFQVLTDC STEVKKGEVI VVCGPSGSGK STLIKCVNAL EPFQKGDIVV 
DGTSIADPKT NLPKLRSRVG MVFQHFELFP HLTITENLTI AQIKVLGRSK EEATKKGLQL
LERVGLSAHA HKHPGQLSGG QQQRVAIARA LAMDPIVMLF DEPTSALDPE MVNEVLDVMV
QLAHEGMTMM CVTHEMGFAR KVADRVIFMD AGKIIEDCKK EEFFGDISQR SERAQHFLEK
ILQH