Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4538 |
Symbol | |
ID | 3712576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5112659 |
End bp | 5113393 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_350266 |
Protein GI | 77460759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.247485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.131551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTA TCAAGAACAT CAACAAGTGG TATGGGGACT TCCAGGTGCT GACCGATTGC AGCACCGAGG TCAAAAAGGG TGAAGTGATC GTGGTCTGCG GTCCGTCCGG TTCGGGCAAG TCGACCCTGA TCAAGTGCGT CAACGCACTG GAGCCGTTCC AGAAAGGCGA CATCGTGGTC GACGGCACGT CGATTGCCGA TCCGAAGACC AACCTGCCGA AACTGCGCTC GCGCGTCGGC ATGGTGTTCC AGCATTTCGA ACTGTTCCCG CACCTGACCA TCACCGAAAA CCTGACCATC GCGCAGATCA AGGTGCTGGG CCGCAGCAAG GAAGAAGCCA CCAAGAAAGG CCTGCAACTG CTCGAGCGCG TCGGCCTGTC GGCTCATGCC CACAAACATC CGGGCCAGTT GTCCGGCGGT CAGCAACAGC GTGTGGCGAT CGCCCGTGCG CTGGCGATGG ACCCGATCGT CATGCTGTTC GACGAACCGA CCTCGGCGCT GGACCCGGAA ATGGTCAACG AAGTGCTCGA CGTAATGGTG CAACTGGCCC ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAAATGGG CTTCGCCCGT AAAGTGGCCG ACCGCGTGAT CTTCATGGAC GCCGGCAAGA TCATCGAAGA CTGCAAGAAA GAAGAGTTCT TTGGCGACAT CAGCCAACGC TCCGAACGCG CGCAGCATTT CCTCGAGAAA ATCCTGCAGC ACTAA
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Protein sequence | MISIKNINKW YGDFQVLTDC STEVKKGEVI VVCGPSGSGK STLIKCVNAL EPFQKGDIVV DGTSIADPKT NLPKLRSRVG MVFQHFELFP HLTITENLTI AQIKVLGRSK EEATKKGLQL LERVGLSAHA HKHPGQLSGG QQQRVAIARA LAMDPIVMLF DEPTSALDPE MVNEVLDVMV QLAHEGMTMM CVTHEMGFAR KVADRVIFMD AGKIIEDCKK EEFFGDISQR SERAQHFLEK ILQH
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