Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4536 |
Symbol | |
ID | 3712574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5111245 |
End bp | 5111991 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_350264 |
Protein GI | 77460757 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.193681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.123252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTACA ACTGGGACTG GGGCGTGTTC TTCAAGTCCA CCGGCGTGGG CAGCGAGACC TATCTCGACT GGTTCATTTC CGGTCTGGGC TGGACCATCG CCATCGCCAT CGTGGCCTGG ATCATCGCCC TGTTGCTCGG CTCGCTGCTG GGCATCATGC GCACCGTGCC GAACCGCATC GTGTCGGGCA TCGCGACCTG CTACGTCGAA CTGTTCCGCA ACGTGCCGCT GCTGGTTCAG CTGTTCATCT GGTACTTCCT GGTGCCCGAT CTGCTGCCGC CGGATCTGCA GGAATGGTAC AAGCAGGACC TGAACCCGAC CACTTCGGCC TACCTGAGTG TTGTCGTGTG CCTGGGCCTG TTCACCGCCG CCCGGGTCTG CGAACAGGTT CGCACCGGTA TCCAGGCACT GCCACGCGGC CAGGAATCCG CCGCCCGCGC CATGGGTTTC AAGCTGCCGC AGATCTACTG GAACGTGCTG CTGCCCCAAG CCTACCGGAT CATCATTCCG CCGCTCACCT CGGAATTCCT GAACGTGTTC AAGAACTCCT CCGTGGCGTC CCTGATCGGT CTGATGGAGC TGCTGGCGCA AACCAAACAG ACCGCCGAAT TCTCGGCCAA CCTGTTTGAA GCCTTCACCC TGGCGACCCT GATCTATTTC ACCCTCAACA TGAGCCTGAT GCTGCTGATG CGCATGGTCG AGAAGAAAGT CGCCGTGCCC GGCCTGATCT CCGTGGGGGG TAAATAA
|
Protein sequence | MNYNWDWGVF FKSTGVGSET YLDWFISGLG WTIAIAIVAW IIALLLGSLL GIMRTVPNRI VSGIATCYVE LFRNVPLLVQ LFIWYFLVPD LLPPDLQEWY KQDLNPTTSA YLSVVVCLGL FTAARVCEQV RTGIQALPRG QESAARAMGF KLPQIYWNVL LPQAYRIIIP PLTSEFLNVF KNSSVASLIG LMELLAQTKQ TAEFSANLFE AFTLATLIYF TLNMSLMLLM RMVEKKVAVP GLISVGGK
|
| |