Gene Pfl01_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4536 
Symbol 
ID3712574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5111245 
End bp5111991 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_350264 
Protein GI77460757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.193681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACA ACTGGGACTG GGGCGTGTTC TTCAAGTCCA CCGGCGTGGG CAGCGAGACC 
TATCTCGACT GGTTCATTTC CGGTCTGGGC TGGACCATCG CCATCGCCAT CGTGGCCTGG
ATCATCGCCC TGTTGCTCGG CTCGCTGCTG GGCATCATGC GCACCGTGCC GAACCGCATC
GTGTCGGGCA TCGCGACCTG CTACGTCGAA CTGTTCCGCA ACGTGCCGCT GCTGGTTCAG
CTGTTCATCT GGTACTTCCT GGTGCCCGAT CTGCTGCCGC CGGATCTGCA GGAATGGTAC
AAGCAGGACC TGAACCCGAC CACTTCGGCC TACCTGAGTG TTGTCGTGTG CCTGGGCCTG
TTCACCGCCG CCCGGGTCTG CGAACAGGTT CGCACCGGTA TCCAGGCACT GCCACGCGGC
CAGGAATCCG CCGCCCGCGC CATGGGTTTC AAGCTGCCGC AGATCTACTG GAACGTGCTG
CTGCCCCAAG CCTACCGGAT CATCATTCCG CCGCTCACCT CGGAATTCCT GAACGTGTTC
AAGAACTCCT CCGTGGCGTC CCTGATCGGT CTGATGGAGC TGCTGGCGCA AACCAAACAG
ACCGCCGAAT TCTCGGCCAA CCTGTTTGAA GCCTTCACCC TGGCGACCCT GATCTATTTC
ACCCTCAACA TGAGCCTGAT GCTGCTGATG CGCATGGTCG AGAAGAAAGT CGCCGTGCCC
GGCCTGATCT CCGTGGGGGG TAAATAA
 
Protein sequence
MNYNWDWGVF FKSTGVGSET YLDWFISGLG WTIAIAIVAW IIALLLGSLL GIMRTVPNRI 
VSGIATCYVE LFRNVPLLVQ LFIWYFLVPD LLPPDLQEWY KQDLNPTTSA YLSVVVCLGL
FTAARVCEQV RTGIQALPRG QESAARAMGF KLPQIYWNVL LPQAYRIIIP PLTSEFLNVF
KNSSVASLIG LMELLAQTKQ TAEFSANLFE AFTLATLIYF TLNMSLMLLM RMVEKKVAVP
GLISVGGK