| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4534 |
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| Symbol | glpD |
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| ID | 3717903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5108258 |
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| End bp | 5109796 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_350262 |
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| Protein GI | 77460755 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.443601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.27831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAT CTACCTTGCG TACGCCCCCT ATCTCCGAGA TCTACGACAT CGCTGTCATC
GGCGGCGGGA TCAATGGCGT TGGGATCGCA GCGGATGCCG CCGGTCGCGG TCTTTCGGTG
TTCCTTTGCG AAAAGGACGA CCTGGCCAGC CACACTTCGT CAGCCAGCAG CAAGTTGATC
CACGGTGGCC TGCGCTACCT CGAACATTAC GAATTCCGTC TGGTGCGCGA AGCATTGGCC
GAACGCGAAG TGCTACTGGC CAAAGCCCCG CACATCGTCA AGCCAATGCG TTTCGTGCTG
CCGCACCGTC CGCACCTGCG TCCGGCATGG ATGATCCGCG CGGGTCTGTT CCTCTATGAC
CACCTCGGCA AGCGCGAAAA ACTGGCTGGC TCGAAAAGCC TGAAGTTCGG CGCCGACAGC
GCACTGAAAA GCGAAATCAG CAAAGGCTTC GAATACTCCG ATTGCTGGGT CGACGACGCC
CGCCTCGTGG TGCTGAACGC CATGGCCGCC CGTGAAAAAG GCGCGCATAT TCACACCCAG
ACCCGTTGTG TCAGCGCCCG CCGCGCCAAG GGTCTTTGGC ACCTGAACCT GGAGCGTGCC
GACGGCAGCC TGTTTTCGAT CACCGCCAAA GCGCTGGTGA ACGCTGCCGG CCCGTGGGTC
GCCAAGTTCA TCCGTGACGA CCTGAAGATG GAATCGCCGT ACGGCATCCG TCTGATCCAG
GGCAGCCACA TCATCGTGCC GAAGCTGTAC GAAGGCGATC ACGCGCACAT TCTGCAAAAC
GAAGATCAGC GCATCGTTTT CACCATCCCG TACCTGAACA ACCTGACCCT GATCGGCACC
ACCGACCGCG AGTACACCGG CGATCCGGCC AAAGTGGCGA TCACCGACGG CGAAACCGAT
TACCTGCTCA AAGTGGTCAA TGCCCATTTC AAGAAGCAAA TCAGCCGTGG CGACATCCTG
CACACCTACT CGGGCGTGCG CCCGCTGTGC AATGACGAAT CCGACAACCC CTCGGCCGTG
ACCCGCGACT ACACCCTGGC GTTGTCCGGC AGCACCGAGG AGGCGCCGCT GCTGTCGGTG
TTCGGCGGCA AGCTGACCAC CTACCGCAAG CTCGCGGAGT CGGCGATGGC GCAGCTGATG
CCGTTCTTCA CCCAGATGCG CCCGAGCTGG ACCGCCACCG CCACCCTGCC CGGCGGCGAA
GACATGACTA CGCCACAGGC CCTGAGCGCG CTGATCCGCG ACAAGTTCGA CTGGGTACCG
ACCGAAATTG CCCGCCGCTG GGCCACCACC TACGGCAGCC GCACCTGGCG CATGCTCGAA
GGCGTCGACA CCCTGGCCGA CTTGGGCGAA CACATCGGCG GCGGGCTCTA CACCCGTGAA
GTCGATTACC TGTGCACTGA AGAGTGGGCC ACCACCGCGC GTGACATTCT GTGGCGTCGC
AGCAAACTGG GCCTGTTCAC CACGCCAGCC GAGCAAGAAA GACTGGCGGC GTACCTGAAC
AAGGTCGAGC AGAACCGCAG CAAGATCGAA GCGGCCTGA
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| Protein sequence | MSTSTLRTPP ISEIYDIAVI GGGINGVGIA ADAAGRGLSV FLCEKDDLAS HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGLFLYD
HLGKREKLAG SKSLKFGADS ALKSEISKGF EYSDCWVDDA RLVVLNAMAA REKGAHIHTQ
TRCVSARRAK GLWHLNLERA DGSLFSITAK ALVNAAGPWV AKFIRDDLKM ESPYGIRLIQ
GSHIIVPKLY EGDHAHILQN EDQRIVFTIP YLNNLTLIGT TDREYTGDPA KVAITDGETD
YLLKVVNAHF KKQISRGDIL HTYSGVRPLC NDESDNPSAV TRDYTLALSG STEEAPLLSV
FGGKLTTYRK LAESAMAQLM PFFTQMRPSW TATATLPGGE DMTTPQALSA LIRDKFDWVP
TEIARRWATT YGSRTWRMLE GVDTLADLGE HIGGGLYTRE VDYLCTEEWA TTARDILWRR
SKLGLFTTPA EQERLAAYLN KVEQNRSKIE AA
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