| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4528 |
|---|
| Symbol | |
|---|
| ID | 3717897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 5101912 |
|---|
| End bp | 5103021 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_350256 |
|---|
| Protein GI | 77460749 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.14822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATG AATTACTGCT GAACCTGCGC AACCTCGCTT GCGGCTATCA AGATCAACGT
GTGGTGCAGA ACCTCAACCT GCACCTCAAC GCCGGTGACA TTGGCTGCCT GCTCGGCTCG
TCCGGCTGTG GCAAGACCAC CACCCTGCGC GCGATTGCCG GTTTTGAGCC GGTGCACGAA
GGGGAAATCT CTCTCGGCGG TGAAGTGATC TCCAGCGCCG GTTTCACCCT CGCTCCGGAA
AAGCGCCGGA TCGGCATGGT GTTCCAGGAC TACGCGCTGT TCCCGCACCT GAGTGTCGCG
GACAATATCG CCTTCGGTAT CCGCAAGCAC CCGAACAAGG AGCGCGTCAC CGAAGAGCTG
CTGGAACTGG TCAACCTGAA GAACCTCGGC AAGCGCTTCC CCCATGAGCT GTCCGGCGGC
CAGCAACAAC GTGTCGCTCT CGCCCGCGCC CTGGCACCGG AGCCGCAGCT GTTGCTGCTC
GACGAGCCGT TCTCCAACCT CGATGGCGAG TTGCGCCGCA AGCTCAGCCA TGAAGTGCGC
GACATCCTCA AGGCCCGTGG CACCAGCGCG ATTCTGGTGA CTCACGACCA GGAAGAAGCC
TTCGCCGTCA GCGATCACGT CGGCGTGTTC AAGGAAGGCC GGCTGGAACA GTGGGACACG
CCGTACAACC TCTATCACGA GCCGGCGACG CCATTTGTCG CAAGCTTCAT CGGTCAGGGT
TACTTCATTC GCGGCCAGCT CGGCAGCCCG GAATCGGTGC AGACCGAACT CGGCGAATTG
CGCGGCAATC GCGCCTACAC CTGGCCGGTC GGTGGCGCAG TGGATGTGCT GCTGCGGCCG
GACGACATCG TTTACGCGCC GGACAGCGGG TTGAAAGCGC GGATCGTCGG CAAGACGTTC
CTCGGCGCCT CGACCCTGTA TCGCCTGCAA CTGCCGACCG GTGCGCAGCT GGAATCGATC
TTCCCAAGCC ATGCCGACCA TCAGGTGGGT GCGGATGTCG GGATTCGAGT GGCAGCGGAA
CATCTGGTGT TGTTCCAGGC CTCCGGCAGC ACGGCGGCGC AGATTCCGGC GGTGGAAAAC
GGCGTCCGCC GTTACAGTAC TGCGCACTGA
|
|---|
| Protein sequence | MSHELLLNLR NLACGYQDQR VVQNLNLHLN AGDIGCLLGS SGCGKTTTLR AIAGFEPVHE
GEISLGGEVI SSAGFTLAPE KRRIGMVFQD YALFPHLSVA DNIAFGIRKH PNKERVTEEL
LELVNLKNLG KRFPHELSGG QQQRVALARA LAPEPQLLLL DEPFSNLDGE LRRKLSHEVR
DILKARGTSA ILVTHDQEEA FAVSDHVGVF KEGRLEQWDT PYNLYHEPAT PFVASFIGQG
YFIRGQLGSP ESVQTELGEL RGNRAYTWPV GGAVDVLLRP DDIVYAPDSG LKARIVGKTF
LGASTLYRLQ LPTGAQLESI FPSHADHQVG ADVGIRVAAE HLVLFQASGS TAAQIPAVEN
GVRRYSTAH
|
|---|
| |