Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4520 |
Symbol | |
ID | 3717889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5094981 |
End bp | 5095655 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ribonuclease T |
Protein accession | YP_350248 |
Protein GI | 77460741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.02449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGAAG ACCATTTCGA CGACGAACTG GACGGTCAAG GTGGCGGCGG TTCCCGTCAT CCAATGGCAG CACGCTTTCG CGGCTACCTG CCGGTTGTCG TCGACGTAGA AACCGGTGGC TTCAACTCGG CCACCGACGC TCTGCTGGAG ATTGCCGCGA CTACCATCGC CATGGATGAA AAGGGTTTCG TCTATCCGGA TCACACCTAC TTCTTCCGCG TCGAGCCGTT CGAAGGCGCC AACGTTGAAC CGGCGGCACT GGAGTTCACC GGGATCAAGC TCGATCATCC GTTGCGCATG GCCGTCAGCG AAGAAACAGC GCTGACCGAC ATCTTCCGTG GCGTGCGCAA GGCCTTGAAA GCCAACGGCT GCAAGCGGGC GATTCTGGTC GGCCACAACA GCAGCTTCGA CCTCGGCTTC CTCAATGCTG CCGTCGCGCG GCTGGACATG AAGCGCAATC CGTTTCACCC GTTCTCCAGC TTCGACACTG CGACCCTCGC GGGTCTGGCC TACGGTCAAA CCGTATTGGC CAAGGCCTGT CAGGCAGCCG ACATCGACTT CGACGGCCGT GAAGCGCACT CCGCGCGTTA CGACACCGAG AAGACGGCCG AGCTGTTCTG CGGCATCGTC AACCGCTGGA AACAGATGGG CGGCTGGGAA GACTTCGACG ACTGA
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Protein sequence | MSEDHFDDEL DGQGGGGSRH PMAARFRGYL PVVVDVETGG FNSATDALLE IAATTIAMDE KGFVYPDHTY FFRVEPFEGA NVEPAALEFT GIKLDHPLRM AVSEETALTD IFRGVRKALK ANGCKRAILV GHNSSFDLGF LNAAVARLDM KRNPFHPFSS FDTATLAGLA YGQTVLAKAC QAADIDFDGR EAHSARYDTE KTAELFCGIV NRWKQMGGWE DFDD
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