Gene Pfl01_4489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4489 
Symbol 
ID3717748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5062077 
End bp5063504 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350217 
Protein GI77460710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0228377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCGC TGCCTCTTCG CTTGTCCGCA CTGTTTCTGG CCCTGGGCCT GAGTGCCTGC 
GATGACGCCC CGCGTTTCAC CAAGGCCGAG CCGGGTGAGG CCCGTTCCGG CGGCGCGGCG
ACCGTGCGCA AGAGCGATCA GAACGCGTTC TCCCTGCCGT CGGCCAACCT GCCGCCCTCG
CGGCGGGTGG ACTTCAGCGT CGGCAACAGC TTCTTCCGCA GCCCGTGGGT GATCGCGCCG
TCGACCACCA CCGCCCGCGA CGGCCTCGGC CCGCTGTTCA ACACCAACGC CTGCCAGAAC
TGCCACATCA AGGACGGCCG CGGCCATCCG CCGACGCCGG ATGCGGCCAA CGCGGTGTCG
ATGCTGGTGC GCCTGTCGAT TCCCGATGCG CCGGCTTATG CCAAGGTCAT CGAACAGGTG
GGCGTAGTGC CGGAGCCCGT CTACGGCGGC CAGTTCCAGG ACATGGCCGT CCCCGGCGTC
GCGCCGGAAG GCAAGGTGCG GGTCGATTAC ACACCGGTGC CGGTCCGCTT CAAGGACGGC
ACCGAGGTCG AGCTGCGTAA ACCGGTCTTG CAGATCACCC AGCTCGGCTA CGGCCCGATG
CACCCGGACA CACGTTTTTC TGCGCGAGTG GCTCCGCCAA TGATCGGCCT GGGCCTGCTC
GAAGCGATCC CGGAAGAAGC GATACTCGCC AACGCCGCCG CGCAGGCCAA AGAGAACAAC
GGCATCAACG GTCGGCCAAA CCGGGTCTGG GACGATGAGC AGCAAAAAAC CGTTATGGGG
CGATTTGGCT GGAAAGCCGG CCAGCCGAAC CTCAATCAAC AAAATGTTCA CGCGTTTTCG
GGTGATATGG GCCTCACGAC CAGCCTGAGA CCGTTTGATG ACTGCACCGA CGCGCAAACC
GCCTGCAAAC AGGCGCCCAA CGGCAATGGC CCGGCCGGAG AACCTGAAGT CAGCGACAAC
ATCCTGCGTC TGGTGCTGTT CTACAGCCGC AACCTCGCCG TTCCCGCCCG CCGTGGCGTC
AACGATGCGC AAGTGCTGGC CGGCAAGAAT CTGTTCTACC AGGCGGGATG CCAGTCCTGT
CACACACCGA AATACACCAC CGCCGCCAAC GCCGCCGAAC CTGAACTGGC CAATCAAGTG
ATTCGCCCGT ACAGCGATCT GCTGCTGCAT GACATGGGCG AAGGCCTGGC GGACAACCGC
ACTGAATTTC AGGCTTCCGG CCGCGACTGG CGCACCCCGC CGCTGTGGGG CATCGGCCTG
ACGCAGGCGG TCAGCGGCCA CACCCAGTTT CTGCATGACG GCCGCGCCCG CAACCTGCTC
GAAGCCGTGC TCTGGCACGG CGGCGAAGCG AAAGCGGCAC AGCAACAGGT TTTGTCTTTC
AACGCCGAGC AGCGTGCCGC GCTGCTGGCG TTCTTGAACT CACTTTAA
 
Protein sequence
MPSLPLRLSA LFLALGLSAC DDAPRFTKAE PGEARSGGAA TVRKSDQNAF SLPSANLPPS 
RRVDFSVGNS FFRSPWVIAP STTTARDGLG PLFNTNACQN CHIKDGRGHP PTPDAANAVS
MLVRLSIPDA PAYAKVIEQV GVVPEPVYGG QFQDMAVPGV APEGKVRVDY TPVPVRFKDG
TEVELRKPVL QITQLGYGPM HPDTRFSARV APPMIGLGLL EAIPEEAILA NAAAQAKENN
GINGRPNRVW DDEQQKTVMG RFGWKAGQPN LNQQNVHAFS GDMGLTTSLR PFDDCTDAQT
ACKQAPNGNG PAGEPEVSDN ILRLVLFYSR NLAVPARRGV NDAQVLAGKN LFYQAGCQSC
HTPKYTTAAN AAEPELANQV IRPYSDLLLH DMGEGLADNR TEFQASGRDW RTPPLWGIGL
TQAVSGHTQF LHDGRARNLL EAVLWHGGEA KAAQQQVLSF NAEQRAALLA FLNSL