| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4487 |
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| Symbol | |
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| ID | 3717746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5058259 |
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| End bp | 5060310 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_350215 |
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| Protein GI | 77460708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0293073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCTGG AACTCAAGAA CAGCTTGTCG GTGAAGTTGC TCCGGGTCGT GCTCCTGTCG
GCATTGATCG TCGGCGTGGT CTTGAGCTGC GCGCAGATCG TTTTCGATGC CTATAAAACA
CGCCAGGCCG TCGCCGGCGA TGCCGAACGC ATCCTCGACA TGTTCCGCGA TCCCTCCACC
CAGGCGGTCT ACAGCCTGGA CCGGGAGATG GGCATGCAGG TGATCGAAGG CCTGTTCCAG
GACGACGCCG TGCGCCAGGC CTCCATCGGC CATCCCAACG AAGCGATGCT CGCGCAGAAA
TCCCGTGAGC TGCAGCATTC CAACAGCCGC TGGCTGACCG ACCTGATCCT CGGCCAGGAA
CGCACCTTCA CCACCCAACT GGTGGGACGC GGCCCCTACA GCGAATATTA CGGCGACCTG
AGCATCACCC TCGACACGGC CACCTACGGT CAGGGCTTCA TCGTCAGTTC GGTGATCATC
TTCATTTCCG GCGTGTTGCG CGCCCTGGCC ATGGGCCTGG TGCTGTACCT GGTCTATCAC
TGGCTGCTGA CCAAACCGCT GTCGCGGATC ATCGAACACC TCACCGAGAT CAACCCGGAC
CGCCCCAGCG AACACAAGAT CCCGCAGCTC AAGGGTCACG AAAAAAACGA ACTAGGGATC
TGGATCAACA CCGCCAACCA GCTACTCGAA TCCATCGAAC GCAATACCCA CCTGCGCCAC
GAAGCGGAAA ACAGCCTGCT GCGCATGGCC CAGTACGATT TCCTCACCGG CCTGCCGAAC
CGCCAGCAAT TACAGCAGCA ACTGGACAAG ATCCTGGTGG ATGCCGGAAA GCTGCAACGC
AGGGTCGCCG TGCTTTGCGT AGGTCTCGAC GATTTCAAAG GCATCAACGA ACAATTCAGC
TACCAGACCG GTGACCAGTT GCTGCTGGCC CTGGCTGACC GGCTACGCGC CCACAGCGGT
CGCCTCGGCG CCCTCGCCCG TCTCGGCGGC GACCAGTTTG CGCTGGTGCA GGCCGATATC
GAACAGCCTT ACGAAGCGGC GGAACTGGCG CAAAGCATTC TCGATGACCT CGAAGCGCCG
TTCGCCCTCG ATCATCAGGA AATCCGCCTG CGCGCGACCA TCGGCATCAC CCTGTTCCCG
GAAGATGGCG ACAGCACCGA GAAGCTGCTG CAGAAAGCCG AACAGACCAT GACCCTGGCC
AAGACCCGAT CGCGCAACCG CTATCAGTTC TATATCGCCA GCGTCGACAG CGAGATGCGC
CGCCGTCGCG AGCTGGAAAA AGACCTGCGC GATGCCTTGC TGCGCGATCA GTTCTACCTC
GTCTATCAGC CGCAGATCAG CTACCGCGAT CATCGCGTGG TCGGGGTCGA GGCCCTGATC
CGCTGGCAGC ATCCGGAACA CGGTCTGGTG CCGCCGGACC TGTTCATCCC GCTGGCGGAA
CAGAACGGCA CCATCATCGC CATCGGCGAA TGGGTGCTGG ATCAGGCCTG CAAGCAACTG
CGCGACTGGC ACGATCAGGG CTTCGTCGAT TTGCGCATGG CGGTCAACCT GTCCACCGTG
CAACTGCACC ACGCCGAGCT GCCCCGCGTG GTCAACAACC TGTTGCAGAT GTACCGCCTG
CCACCGCGCA GCCTGGAGCT GGAAGTCACC GAAACCGGCC TGATGGAAGA CATCAGCACC
GCCGCCCAGC ACCTGCTGAG CCTGCGCCGC TCCGGCGCCC TGATCGCCAT CGACGACTTC
GGCACCGGCT ATTCGTCGCT GAGTTATCTC AAGAGTCTGC CGCTGGACAA GATCAAGATC
GACAAGAGCT TCGTCCAGGA CCTGCTGGAT GACGACGATG ACGCGACCAT CGTTCGCGCC
ATCATTCAAC TGGGCAAGAG CCTGGGCATG CAGGTGATCG CCGAGGGCGT GGAAACCGCC
GAACAGGAAA CCTACATCAT CTCCGAAGGC TGCCACGAAG GTCAGGGCTA CCACTACAGC
AAACCGCTGC CGGCACGCGA GTTGAGCATT TACCTCAAGC AGGCCCAGCG CAGCAACGCG
GCCATTCTCT GA
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| Protein sequence | MKLELKNSLS VKLLRVVLLS ALIVGVVLSC AQIVFDAYKT RQAVAGDAER ILDMFRDPST
QAVYSLDREM GMQVIEGLFQ DDAVRQASIG HPNEAMLAQK SRELQHSNSR WLTDLILGQE
RTFTTQLVGR GPYSEYYGDL SITLDTATYG QGFIVSSVII FISGVLRALA MGLVLYLVYH
WLLTKPLSRI IEHLTEINPD RPSEHKIPQL KGHEKNELGI WINTANQLLE SIERNTHLRH
EAENSLLRMA QYDFLTGLPN RQQLQQQLDK ILVDAGKLQR RVAVLCVGLD DFKGINEQFS
YQTGDQLLLA LADRLRAHSG RLGALARLGG DQFALVQADI EQPYEAAELA QSILDDLEAP
FALDHQEIRL RATIGITLFP EDGDSTEKLL QKAEQTMTLA KTRSRNRYQF YIASVDSEMR
RRRELEKDLR DALLRDQFYL VYQPQISYRD HRVVGVEALI RWQHPEHGLV PPDLFIPLAE
QNGTIIAIGE WVLDQACKQL RDWHDQGFVD LRMAVNLSTV QLHHAELPRV VNNLLQMYRL
PPRSLELEVT ETGLMEDIST AAQHLLSLRR SGALIAIDDF GTGYSSLSYL KSLPLDKIKI
DKSFVQDLLD DDDDATIVRA IIQLGKSLGM QVIAEGVETA EQETYIISEG CHEGQGYHYS
KPLPARELSI YLKQAQRSNA AIL
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