Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4469 |
Symbol | |
ID | 3717668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5039726 |
End bp | 5040829 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_350197 |
Protein GI | 77460690 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.290922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.355969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGAGC ACGATCTGAA CAGGCGTCAA TTCATCAAAA CCGTCGGCGT GGCCTCGGTG GCTGCGGCGG CCATGAGCAT GCCCTTCATC CGGGCCAGTG CCAGCGACAC CCGTTTTGCC GGCAAGACCC TGCGCCTGTT GACCTGGTCC GATGACACGG GCCTGGCCGC ACTGCGCAAT ATCGCGGCAA CGTTCGAAGC CAAGACTGGC GCCAAAGTGA TTGCCGACCG CACTGGCAGC ACCTCGGAAA TGGTCGCCAA ACTCAAGGCC GGCGGTGATC GTCCGCAGTA CGACATCATC ACTCTGGCTG GCGTTGGCGC CGAAGGTCTG GCCGCTGCCG GGTTGCTGGA AAAACCCGAC CTCAACCGCA TTCCCAACCT GATCGACGTC CCGGAAAAAT ACCGCACCGG GGCCAACGGT CACGGCATCG GCTACCTGCT GTGGTGCAAC AGCCTGGTCT ACAGCACCCG CACTCAGAAG GAAGCGCCGG ACAGTTACGC CGCGCTGTGG GACGCCGATC TGGCACCGAA CATTTTCCTG CCACCGCCGA ACTGGACCGA GGCGATGGAC CTGATCATCA TTGCCGCCAA ACTGGCCGGT GGTGACGAGC ACAACATCGA ACCGGGCTTC AAGAAACTCG CGGAGCTGAA AGACCGCGTG GTGACCCTGG GCGAAAACCC CAACCAGATC GCCGAGCTGT TCCGCACCGG CTCCCTGGAC ATGGGCGGCC TCTACGCCCC GGCGTTTTTC CCCAAGCAGA TCCGCGACCC GAACTATGGC CTGGGCGCCA CGTTCGGCAT GAAGGAAGGT TTCTACACCG ACCTGATGCT CTCGGTGATG CCGAAGAACC GTCCGGGCGA CACCGACCTG GCCTACGCCT TCATCGATCA CTCCCTCGAC CCGCTGGTGC AGGGCAAGAT GGCCGAAGAC ATCTTCAACG GTCCGGTCAA CGCCAAGGCG ATCATCTCCG CCGAAGCACG CAAGAGCCCG TTCATCCTCA CGCCGGAGCA GATCGCGGAG AAGGCGATCA TGCACGACAA CGCCTTCCTG GCGACCGTGC ATGACCAGTG GATTCGTCGC TACACGGAAA TCTTTTCTTC CTGA
|
Protein sequence | MGEHDLNRRQ FIKTVGVASV AAAAMSMPFI RASASDTRFA GKTLRLLTWS DDTGLAALRN IAATFEAKTG AKVIADRTGS TSEMVAKLKA GGDRPQYDII TLAGVGAEGL AAAGLLEKPD LNRIPNLIDV PEKYRTGANG HGIGYLLWCN SLVYSTRTQK EAPDSYAALW DADLAPNIFL PPPNWTEAMD LIIIAAKLAG GDEHNIEPGF KKLAELKDRV VTLGENPNQI AELFRTGSLD MGGLYAPAFF PKQIRDPNYG LGATFGMKEG FYTDLMLSVM PKNRPGDTDL AYAFIDHSLD PLVQGKMAED IFNGPVNAKA IISAEARKSP FILTPEQIAE KAIMHDNAFL ATVHDQWIRR YTEIFSS
|
| |