Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4468 |
Symbol | |
ID | 3717667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5038746 |
End bp | 5039654 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | binding-protein dependent transport system inner membrane protein |
Protein accession | YP_350196 |
Protein GI | 77460689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.289688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.321771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACATC AATCCCTGAC CCAACCGGTC GGCACGGGTG ACGTGCGCCC GGCGCGCGGT GTTTCGCCGA CCGCGCGGGC GTGGTTTTTC CTCACGCCGT CGATGCTGTT TCTCGGCGTG CTGATTGCCG CCAGCCTGCT GGTGCTGCGC ATGAGCGTCG GCACCAAGGG GGCGGAGTGG TCCGGTTTCA GCCTGGCCAG TTACGCGCAG TTGCTCGAAC CCTACTACCT CAAATCGTTG CTGCTGACCT TGCGTCTGGC GCTGATCAGC GCGGTGGTCG CGGTGGTGCT GGCGATCCCG GTGGCGTACA CCATGTCGCG CCTGACCTCG CCATTCGTGC GGCGGATTTT TCTGGCGGCG GTGCTGTTGC CGCTGCTGGT CAACCTGTTG CTGCAAAGCT ACGGCTGGCT GGTGATCCTC GGCCCCGGCG GCATGCTCAA CCAGACCCTG ATGGGCCTGG GTCTGATCAA GCGGCCGATC ATGTTGCTGT ACAACCAGAA TGGCGTGTTG ATGGGCCTGG TGCAGACCGC GTTCCCGCTG GCCGTGCTGC CGATTGCCAG CGCCATGCGC GGTGTCGCCC GCAGCTACGA AGAAGCTGCC GCCACCCTCG GTGCCAGTCG TTTTCAGGTG TTCCGCCAGG TGGTGTTGCC AATGAGTTTG CCGGGAATCA TCACCGGCGC GACCCTGGTG TTCGCCTACA ACGCCAGCAG CTTCGTGGTG CCGCTGTTGC TCGGTGGTCG GCGCGTGCCG ATGCTGGCGG TGATGGTGCA TGACCAGATC GCCCCGCTGA TGAACTGGCC TGCCGCGTCC GCCGCCGGGG TGGTGCTGAT CGTCACTACG CTCGCCATCA TGACCTTGTC CGAATACATC ACCGGCCGCC GTCGCCGTCT GCTGGAGGCT TCGCAATGA
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Protein sequence | MEHQSLTQPV GTGDVRPARG VSPTARAWFF LTPSMLFLGV LIAASLLVLR MSVGTKGAEW SGFSLASYAQ LLEPYYLKSL LLTLRLALIS AVVAVVLAIP VAYTMSRLTS PFVRRIFLAA VLLPLLVNLL LQSYGWLVIL GPGGMLNQTL MGLGLIKRPI MLLYNQNGVL MGLVQTAFPL AVLPIASAMR GVARSYEEAA ATLGASRFQV FRQVVLPMSL PGIITGATLV FAYNASSFVV PLLLGGRRVP MLAVMVHDQI APLMNWPAAS AAGVVLIVTT LAIMTLSEYI TGRRRRLLEA SQ
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