Gene Pfl01_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4460 
Symbol 
ID3717659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5032741 
End bp5033499 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350188 
Protein GI77460681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.887396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC TGCCTCAAAT CACCCTGGCC TTCTGGGTCA TGAAAATCTG CGCGACGACC 
CTGGGGGAAA CCGCGGGGGA TTTGTTGTCG ATGACCCTTA ACGTCGGCTA CGCCATCAGC
TCGCTGATCC TGATCAGCGT GTTTGTCCTG ACCCTGATCA CGCAATTGAT GTCCAAGACC
TACAAGCCGC TGCTGTACTG GATCGTGATC CTGTCGACCA GCACCGCCGG CACCACCATG
TCGGACTTCA TGGATCGCAC GCTGGAACTG GGTTACGCCA CCGGTTCCAT GATTCTGATC
GCGATCCTGC TGGCGATCTT CGCGGCATGG CGCCTGAGCG GCGACTCGCT CAACGTCACC
AAGGTGCAGA GTTTTCGCGG CGAGATGTTC TACTGGATGG CGATTCTGTT CTCCAACACC
CTGGGCACCG CGCTCGGCGA TTACCTGGCG GACGACTCGG GTCTGGGCTT TGCCGGTGGC
GCGCTGTTGA TCGGCTCGGC GATTGGCGTA GTCGTGCTGC TCAAGTACTT CACGAAGATT
TCGACGGTGG CGCTGTTCTG GGTGGCGTTC GTGCTGACCC GGCCGTTTGG CGCGACCCTG
GGCGACTTGA TGACCAAGTC CCATGAGAAG GGCGGTCTGG ACTTCGGCAC CATCGGTTCG
TCGGCGGTAC TGGCGGGGAT TCTGCTGGTG ATGATCGTGG GCGCGTCTTA TGCGCAGAAG
CGCTATGGCA GCAAACAGGG CGTTGCCGAA TTGTCCTGA
 
Protein sequence
MNKLPQITLA FWVMKICATT LGETAGDLLS MTLNVGYAIS SLILISVFVL TLITQLMSKT 
YKPLLYWIVI LSTSTAGTTM SDFMDRTLEL GYATGSMILI AILLAIFAAW RLSGDSLNVT
KVQSFRGEMF YWMAILFSNT LGTALGDYLA DDSGLGFAGG ALLIGSAIGV VVLLKYFTKI
STVALFWVAF VLTRPFGATL GDLMTKSHEK GGLDFGTIGS SAVLAGILLV MIVGASYAQK
RYGSKQGVAE LS