Gene Pfl01_4459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4459 
Symbol 
ID3717658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5031358 
End bp5032677 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content60% 
IMG OID 
Productcitrate-proton symport 
Protein accessionYP_350187 
Protein GI77460680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACT CCAACGCCCT GCCTCTTGGG TCGGCTGCCG TGCCGGCCAA AGAACGAACC 
ACCGCCAGTC GCATCAAGTC GATCTTCAGC GGTTCCGTCG GCAACATGGT CGAGTGGTAC
GACTGGTACG TCTATGCCGC CTTCTCGCTG TATTTCGCCA AAGCCTTCTT CCCCAAAGGC
GACACCACCG CCCAACTGCT CAACACCGCC GCGATCTTCG CCGTGGGCTT CCTGATGCGC
CCGATCGGTG GCTGGCTGAT GGGGCTGTAC GCCGACAAGG TCGGACGCAA AAAAGCCCTG
ATGGCCTCGG TTTACCTGAT GTGCTTCGGC TCGCTGATCA TCGCCCTGAG CCCGGGCTAT
GAAACCATCG GTGTCGGCGC GCCGATCCTG CTGGTGTTCG CCCGCCTGCT GCAAGGCCTG
TCGGTCGGTG GCGAATACGG CACCTCGGCG ACCTACCTGT CGGAGATGGC GACCAAGGAT
CGTCGCGGCT TCTTCTCCAG CTTCCAGTAC GTGACTTTGA TTTCCGGCCA GCTCATCGCG
CTGGGCGTGC TGATCGTGCT GCAACAGTTC CTGACCACCG AAGAGCTTTA CGCGTGGGGC
TGGCGTATTC CGTTCGCCAT CGGTGCGCTG TGCGCAATCG TGGCGCTGTA CCTGCGTCGT
GGCATGGAAG AAACCGAGTC GTTCACCAAG AAAGAGAAGT CCAAGGAAAG CGCCATGCGC
ACCTTGCTTC GTCATCCGAA GGAACTGCTG ACCGTGGTCG GCCTGACCAT GGGCGGTACG
CTGGCGTTCT ACACCTACAC CACCTACATG CAGAAATACC TGGTGAACAC CGTCGGCATG
AGCATCTCCG ACTCCACCAC CATTTCCGCC GCCACGCTGT TCCTGTTCAT GTGCCTGCAA
CCGATCATCG GCGGCCTGTC GGATAAAATC GGTCGTCGCC CGATCCTGAT CGCCTTCGGC
GTGCTCGGTA CGATCTTCAC CGTGCCGATC CTGATGACCC TGCACACCAT CCAGACCTGG
TGGGGCGCGT TCTTCCTGAT CATGGCGGCG CTGATCATTG TCAGCGGCTA CACCTCGATC
AACGCCGTGG TGAAGGCCGA GCTGTTCCCG ACCGAAATCC GCGCCCTGGG CGTCGGCCTG
CCGTACGCAC TGACCGTGTC GATCTTCGGC GGCACCGCCG AATACATCGC GCTGTGGTTC
AAGAGCATCG GCATGGAAAC CGGTTATTAC TGGTACGTGA CCGCGTGCAT CGCGGTGTCC
CTGCTGGTGT ACATCACCAT GAAAGACACG CAGAAACATT CTCGGATCGT CACTGACTGA
 
Protein sequence
MDNSNALPLG SAAVPAKERT TASRIKSIFS GSVGNMVEWY DWYVYAAFSL YFAKAFFPKG 
DTTAQLLNTA AIFAVGFLMR PIGGWLMGLY ADKVGRKKAL MASVYLMCFG SLIIALSPGY
ETIGVGAPIL LVFARLLQGL SVGGEYGTSA TYLSEMATKD RRGFFSSFQY VTLISGQLIA
LGVLIVLQQF LTTEELYAWG WRIPFAIGAL CAIVALYLRR GMEETESFTK KEKSKESAMR
TLLRHPKELL TVVGLTMGGT LAFYTYTTYM QKYLVNTVGM SISDSTTISA ATLFLFMCLQ
PIIGGLSDKI GRRPILIAFG VLGTIFTVPI LMTLHTIQTW WGAFFLIMAA LIIVSGYTSI
NAVVKAELFP TEIRALGVGL PYALTVSIFG GTAEYIALWF KSIGMETGYY WYVTACIAVS
LLVYITMKDT QKHSRIVTD