Gene Pfl01_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4444 
Symbol 
ID3717604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5004581 
End bp5005915 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350172 
Protein GI77460665 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0725807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCCT CGCGCCTGCT GTTGATCTGG CTGGCGTTCC TGCTGGCCAT CGGCATTGTG 
CTGGGCGCGT TGCAGGCGCT GGATGTGGAA GTGCCATCGA GCCTGTTGTC GATCAACTGG
GGTTTGTTGC TGGCGCTGTT TGCGCTGAGC CTGCTGGACG CGCTGCGTCT CAAGCGTCTG
CCCTCGCCCC GCGTGCAACG ACAGGTGCCC GGCAGCCTGG CCCTCGGTCG CTGGAGCGAT
ATCCGGCTGG AAGTCGAACA CGAGCTCGAC CAGCCACTGG CCATTCAAAT CTTCGACCAC
GTACCCGACA GCCTCGGCTA CGAAAACCTG CCGCTCTCCA CCGAGCTGCA ACCCGGCCAG
CGCAGCCTGA TCGGCTATCG CCTGCGCCCG CTCAAACGCG GCCACTACAC CTTCGAAACC
TGCGAACTCA ACCTGCCGAG CCCCTTCGGC CTGTGGTCCG GCAAACGCCT GCTGACCATC
ACCGACCACA CCCGCGTCTA CCCCGACTTC GCCCGCCTCT ACGGCGGCCA GTTGCTGGCG
GTCGACAACT GGCTCAGCCA GCTCGGCGTG CGTCAGCGCC AGCGTCGTGG CCTGGGAATG
GAATTCCATC AGCTCAGGGA ATTTCGCGAA GGCGACAGCC TGCGCCAGAT CGACTGGAAA
GCCACCGCCC GCCATCGCAC CCCGATTGCC CAGGAGTACG AAGACGAGCG GGATCAACAG
ATTGTTTTCA TGCTCGATTG CGGGCGGCAG ATGCGCAGTC AGGATGGGGA CCTGTCGCAT
TTCGATCATG CGTTGAATGC GTGTTTGCTG TTGAGTCATG TGGCGTTGCG GCAGGGGGAT
GCGGTGGGAT TCATGACCTT TGCCAGTGAT CAGCCGCGGT TTATTGCACC GGTCAAAGGT
GCGGGGCAGC TCAAGGTGTT GCTCAACGGT GTTTATGACC TGGATAGCAC GCGGCGTTCG
GCGGATTATC CGGCGGCGGT AAATCAGTTG CTGGCGAGGC AGAAGCGTCG GGCGCTGGTG
GTGTTGGTGA CGAATGTGCG GGATAAGGAT GATGAGGAAT TGCTGAACGC CGTCAGACAA
TTAAGCCAAC AGCATCAAGT ACTCGTGGCC AGCCTGCGTG AAAGCACGCT TGAAGATAGA
CGGCATTCGC AGGTGCAAAC GATTGAGCAA GCGCTTGAAT ACTGCGCAAC AGTGGATTAC
CTGAACGCCC GATCGGTGCT CCATGAAAAA TTGAGTGCCC AAGGAGTGCA AGTGATAGAT
GCCCCCCCAA GTGAATTGAG TACAGACGTA ATTTCGCGGT ATCTGAGCTG GAAAAAATCT
GGAGCACTCT GCTAA
 
Protein sequence
MKPSRLLLIW LAFLLAIGIV LGALQALDVE VPSSLLSINW GLLLALFALS LLDALRLKRL 
PSPRVQRQVP GSLALGRWSD IRLEVEHELD QPLAIQIFDH VPDSLGYENL PLSTELQPGQ
RSLIGYRLRP LKRGHYTFET CELNLPSPFG LWSGKRLLTI TDHTRVYPDF ARLYGGQLLA
VDNWLSQLGV RQRQRRGLGM EFHQLREFRE GDSLRQIDWK ATARHRTPIA QEYEDERDQQ
IVFMLDCGRQ MRSQDGDLSH FDHALNACLL LSHVALRQGD AVGFMTFASD QPRFIAPVKG
AGQLKVLLNG VYDLDSTRRS ADYPAAVNQL LARQKRRALV VLVTNVRDKD DEELLNAVRQ
LSQQHQVLVA SLRESTLEDR RHSQVQTIEQ ALEYCATVDY LNARSVLHEK LSAQGVQVID
APPSELSTDV ISRYLSWKKS GALC