Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4417 |
Symbol | |
ID | 3713320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4974530 |
End bp | 4974964 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | histidine triad (HIT) protein |
Protein accession | YP_350145 |
Protein GI | 77460638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00244718 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGCAG TGTTTGCTTT AGATTCACGA CTTCAACAGG ACACGCTGAC CATCGGCGAT TTCCCGCTGT GCCGACTGCT GTTGTCCAAT GACGCCAACT ACCCGTGGTT CATCCTGGTG CCACGCCGCG ACGATATCAG CGAGTTGTTT CAGTTGGATG TCGCCGACCA GCAGCGCCTG TGGCAGGAAA CCACCGCATT GGCCGAGGTG CTAAAGGATT CCTTCGACGC CGACAAGATG AATGTGGCGA CCCTGGGTAA CGTGGTCAGC CAGTTGCATA TGCATGTGAT CGTGCGTAAG CGGGACGACG CCGCCTGGCC GGCGCCGGTC TGGGGCAAGC ACCCCGCCAA GCCTTACAGC GCCGAGCAAG TGGCCGCGAT CCGCGAGCGC CTGCGCCTGG TGCTGGACGA AGATTTCACC TTTCTGGAGG GCTGA
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Protein sequence | MRAVFALDSR LQQDTLTIGD FPLCRLLLSN DANYPWFILV PRRDDISELF QLDVADQQRL WQETTALAEV LKDSFDADKM NVATLGNVVS QLHMHVIVRK RDDAAWPAPV WGKHPAKPYS AEQVAAIRER LRLVLDEDFT FLEG
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