Gene Pfl01_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4405 
Symbol 
ID3713308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4965433 
End bp4966098 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_350133 
Protein GI77460626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0344768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAGCC TGGTCAGCAA TGCCAGCATC GTGGTGCAGT TGGTAATGTT GACTCTGGTG 
GCCGCATCGG TGACCTCATG GATCATGATC TTTCAGCGCA GCAATCTGAT ACGCGCCGGT
CGACGTGCCC TCGAGAGCTT CGAGGAGCGA TTCTGGTCGG GTATCGACCT GTCCAAACTC
TACCGTCAGG CTGGCAGCAA TCCGGATCCG GATTCCGGCG TCGAGCAGAT CTTCCGTGCC
GGCTTCAAGG AGTTCTCCCG TCTGCGTCAG CAGCCAGGCG TCGATCCTGA AGCGGTGATG
GAAGGCGTGG CCCGTGCCAT GCGCGTCGCC ATCTCCCGTG AGGAAGAGAA ACTCGAGCAG
AGCCTGCCGT TCCTCGCCAC CGTAGGTTCC GTCAGCCCGT ACATCGGTCT GTTCGGTACC
GTCTGGGGGA TCATGAACTC CTTCCGTGGT CTGGCCAGCG CCCAGCAGGC CACTCTGGCC
ACCGTCGCAC CCGGCATCGC CGAAGCCCTG ATCGCCACCG CGATCGGTCT GTTCGCCGCG
ATCCCGGCCG TTATTGCTTA CAACCGTTTC TCTGCCCGCA GCGAAACCTT GCTGAGCCGC
TACTACACCT TCGCCGATGA GTTCCAGGCG ATCCTGCACC GCAAAGTGCA CACCAGCGAA
GAATAA
 
Protein sequence
MWSLVSNASI VVQLVMLTLV AASVTSWIMI FQRSNLIRAG RRALESFEER FWSGIDLSKL 
YRQAGSNPDP DSGVEQIFRA GFKEFSRLRQ QPGVDPEAVM EGVARAMRVA ISREEEKLEQ
SLPFLATVGS VSPYIGLFGT VWGIMNSFRG LASAQQATLA TVAPGIAEAL IATAIGLFAA
IPAVIAYNRF SARSETLLSR YYTFADEFQA ILHRKVHTSE E