Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4402 |
Symbol | tolB |
ID | 3713305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4962580 |
End bp | 4963824 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | translocation protein TolB |
Protein accession | YP_350130 |
Protein GI | 77460623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.145947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATG AAAAGAACAT TCTGGTCACC AGCGGCAGCG ATCGGGCAAC GCCGATCGCC GTCGTGCCGT TCGGTTTCCA GGGCGGTGCT GTCCTGCCGG ATGACATGGC TGAAATCATT GGTAACGATT TGCGCAACTC GGGCTACTAC TCGCCGATTC CAAAGCAAAA CATGATCAGC CAGCCAAGTC AGCCGAGCGA AATCATCTTC CGTGACTGGA AGGCGGTGGG CGCGCAATAC ATGATGGTCG GCAGCATCGT GCCGGCCGGC GGCCGTCTGC AGGTGCAGTG GGCTCTGTTC AACGTCGCCA CCGAACAGAA AGTGGCTGAC GGCAGTGTGT CCGGTACCAC CGAACAGCTG CGTGACATGG CGCACTACAT CTCCGATCAG TCGTTCGAAA AACTGACCGG CATCAAAGGT GCATTCTCGA CTCGCCTGCT GTACGTCACG GCCGAGCGTT TCTCCGAGAA GAACACCCGT TACACCCTGC AGCGTTCGGA TTATGACGGC GCCCGCGCCG TGACCCTGCT GCAATCGCGC GAGCCGATCC TGTCGCCGCG TTTTGCACCG GACGGCAAGC GTATCGCCTA CGTGTCGTTC GAACAGAAGC GTCCGCGCAT CTTCATGCAG AACATCGACA CCGGTCGCCG CGAGCAGATC ACCAACTTCG AAGGCCTGAA CGGCGCGCCT GCCTGGTCGC CGGACGGCAA TCGCCTGGCG TTCGTACTGT CGAAAGACGG TAACCCTGAC ATCTACGTGA TGAACCTCGG TTCGCGTCAG ATCACTCGCG TGACTGCAGG TCCTGGCATC AACACCGAAC CGTACTGGGG CAAGGATGGC TCGACCATCT ACTTCACCTC CGACCGTGGC GGCAAACCGC AGATCTACAA GACCAGCGCT GGTGGCGGCG GTGCCGAGCG TGTGACGTTC GTGGGCAACT ACAACGCCAA CCCGAAGCTT TCGGCGGATG AAAAGACCCT GGTGATGATC CATCGTCAGG ACGGTTTCAC CAATTTCAAA GTGGCGGCTC AGGATTTGCA GCGCGGAAGT GTAAAAATCC TCACTGATAG CACTCTGGAC GAGTCGCCTA CTGTTGCGCC CAACGGCACC ATGGTAATCT ACGCCACCCG CCAGCAGGGC CGGGGAGTCT TGATGCTCGT GTCCATTAAT GGACGCGTGA GGCTCCCGCT TCCTACCGCT CAAGGCGAAG TCAGAGAACC GTCCTGGTCC CCTTACCTGA ACTGA
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Protein sequence | MADEKNILVT SGSDRATPIA VVPFGFQGGA VLPDDMAEII GNDLRNSGYY SPIPKQNMIS QPSQPSEIIF RDWKAVGAQY MMVGSIVPAG GRLQVQWALF NVATEQKVAD GSVSGTTEQL RDMAHYISDQ SFEKLTGIKG AFSTRLLYVT AERFSEKNTR YTLQRSDYDG ARAVTLLQSR EPILSPRFAP DGKRIAYVSF EQKRPRIFMQ NIDTGRREQI TNFEGLNGAP AWSPDGNRLA FVLSKDGNPD IYVMNLGSRQ ITRVTAGPGI NTEPYWGKDG STIYFTSDRG GKPQIYKTSA GGGGAERVTF VGNYNANPKL SADEKTLVMI HRQDGFTNFK VAAQDLQRGS VKILTDSTLD ESPTVAPNGT MVIYATRQQG RGVLMLVSIN GRVRLPLPTA QGEVREPSWS PYLN
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