Gene Pfl01_4396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4396 
Symbol 
ID3712839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4957662 
End bp4958150 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID 
ProductRDD 
Protein accessionYP_350124 
Protein GI77460617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.327978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC ACCTGCTCAC GCCCCAGGGC AATTTCCCCG CCGTCGGCCT GGGCCGTCGT 
CTGGCAGCGA TGTTCTATGA CTTTCTGCTG TGCACCGCCC TGCTGATCGT GACCGGTGGC
GTCTACAAGA TGATCCAGGC CGCGATCATC GGTGAGGAGC GTCTGCGGGT TCTGACCGAC
GCCGGGCAGC TGGATGGCGA TCCTCTCTAC TCCACGGTGC TGCTGCTGGT GCTGTTTGGT
TTCTTCGCCA AGTTCTGGAC TCACGCCGGG CAGACGCTGG GCATGCAGGT CTGGGGCATT
CGCGTGCAGA ACGCTGATGG CACTGCAATC AGCCTGTGGC AGGCGTTGCT GCGGTTCATG
GTGTCGATTG CATCGTGGCT CTGCCTGGGC CTGGGGTTCT TCTGGTCACT GTTCGACAAA
CAGAAACGCG CCTGGCATGA CATCTACTCC GACACGCAGC TCGTGCGAAT TCCGAAGAAA
GCCAAATAA
 
Protein sequence
MSKHLLTPQG NFPAVGLGRR LAAMFYDFLL CTALLIVTGG VYKMIQAAII GEERLRVLTD 
AGQLDGDPLY STVLLLVLFG FFAKFWTHAG QTLGMQVWGI RVQNADGTAI SLWQALLRFM
VSIASWLCLG LGFFWSLFDK QKRAWHDIYS DTQLVRIPKK AK