Gene Pfl01_4368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4368 
Symbol 
ID3715096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4921385 
End bp4922230 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content60% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_350096 
Protein GI77460589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.250466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGTC TCGCTTCGAA ACCCGCCATC AGCCTGAGTC GCGTCGCGAT TTACGCGGTG 
CTGATCCTCG CGGTCCTGCT GTATCTGGTA CCGCTGGTGG TCATGCTGCT GACCAGCTTC
AAGACCCCGG AAGACATCTC CACCGGCAAC CTGCTGAGCT GGCCGACCGT GGTCAGCGGC
ATCGGCTGGG TGAAAGCCTG GGCGACTGTT GACGGCTACT TCTGGAACTC GATCAAGATC
ACCGTTCCGG CCGTGATCAT CTCCACCGCC ATCGGTGCGT TGAACGGTTA TGTACTGTCG
TTCTGGCGCT TCCGTGGTTC GCAGCTGTTT TTCGGCCTGT TGCTGTTCGG CTGCTTCCTG
CCGTTCCAGA CCGTGCTGCT GCCGGCCTCG TTCACCCTCG GCAAGATGGG CCTGGCGAGT
ACGACCACCG GCCTTGTGTT CATCCATGTG GTCTACGGTC TGGCGTTCAC CACGCTGTTC
TTCCGTAACT ACTACGTGAG CATTCCGGAT GCGCTGATCA AAGCGGCACG TCTCGATGGC
GCGGGCTTCT TCACGATCTT CCGCCAGATC ATCCTGCCGA TGTCCACCCC GATCATCATG
GTCTGCCTGA TCTGGCAGTT CACCCAGATC TGGAACGACT TCCTGTTCGG CGTGGTGTTC
TCCAGCGGTG ATTCGCAACC GATCACGGTG GCGCTGAACA ACCTGGTCAA CACCAGCACC
GGGGCCAAGG AATACAACGT GGATATGGCG GCGGCGATGA TCGCCGGGCT GCCGACCCTG
CTGGTCTATG TGGTCGCAGG CAAGTATTTC GTGCGCGGGC TGACGGCCGG CGCAGTCAAG
GGGTAA
 
Protein sequence
MTSLASKPAI SLSRVAIYAV LILAVLLYLV PLVVMLLTSF KTPEDISTGN LLSWPTVVSG 
IGWVKAWATV DGYFWNSIKI TVPAVIISTA IGALNGYVLS FWRFRGSQLF FGLLLFGCFL
PFQTVLLPAS FTLGKMGLAS TTTGLVFIHV VYGLAFTTLF FRNYYVSIPD ALIKAARLDG
AGFFTIFRQI ILPMSTPIIM VCLIWQFTQI WNDFLFGVVF SSGDSQPITV ALNNLVNTST
GAKEYNVDMA AAMIAGLPTL LVYVVAGKYF VRGLTAGAVK G