| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4366 |
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| Symbol | |
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| ID | 3715094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4918743 |
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| End bp | 4920089 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_350094 |
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| Protein GI | 77460587 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00370105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA ACAACAACGC TCAGCGAATC GGCCAGTTGT CAGCGGTTGC GGCAATGATG
CTGGCCGGCA GCGTCCACGC GGCTGACGCG TTCAGCTCCG ATTCGGAGTG GATGACCGGG
GACTGGGGTG GCGAACGTAC CAAGCTGATC GAGCAGGGTA TCGACATCAA GATGGACTAC
GTCGGTGAGG TGGGCGGCAA CCTGCACGGC GGCTACAACA ACGACAAGAC GGCGCGTTAC
TCCGACCAGT TCGGTCTGGG CGTGGCGCTG GACCTGCAAA AACTGTGGGG CTGGGACAAC
ACCCAGGCCA AGATCCAGCT GACCAACCGT AATGGCGAAA ACATTTCCAA CGATCGTGTT
GGCGATCCGC GTGCCGGCAC ACTCAGCTCC TCGCAGGAAG TCTACGGTCG TGGCCACATG
GTGCGTCTGA CCCAGTTGTG GATCAAACAC CAGTTCTTCG ACAACAAGCT CGACGTCAAG
GCCGGTTACT TCGGCGAAGG CGAAGACTTC AACACCTTCC CGTGCGAGTT CCAGAACCTG
GCGTTCTGCG GTTCGCAAGT GGGTAACTGG GCGACCAACA TCTGGTACAA CTGGCCAGTC
AGCCAGGCGG CGATTCGCGT CAAGTACAAC ATCAACGACG AGCTCTACGC GCAGATCGGT
GCGTACAACC AGAACCCGTC GCAACTGGAA CACGGCAACG GCTTCAAGTT GAGCGGCAGC
GGCACCAAAG GCACCGTGTT GCCAGTGGAA CTGGTCTGGT CGCCTAACCC GAACGGCCTG
CCGGGCGAAT ACCGTGTCGG TTACTACAAG AGCACGGCCG ATGCCGACGA CGTTCGCGAA
GACGTCAACG GTTTCGACGC TGCGACCACC GGTGATGCCT ACCGTACCCA CAGCAGCAAG
CACGGTTACT GGTTCGTTGC ACAGCAGCAA CTCACCAGCC ACAACGGTGA CAAGAGCCGT
GGTCTGAGCA TTGCTGCCAA CGCTACGTTC CACGACAAGG ACACCAACTT CATCGACAAC
TATCAGTCCG TGATGTTTGT GTACAAAGGC CCGTTCGATG CGCGTCCGAA GGATGACTTC
GGTATTGGTG CTGCGCGTAT TCACGTCAAC GATGACGTGA AGAAAAACGC CGAACTGCTC
AACGTCTCCA ACGGTGTTTC GGACTACGAC AATCCGGTGT TCGCGCCGAT TCGTGAAACC
GAATACAACT ACGAGATCAA CTACGGCTTC CATGTGACCA ACTGGCTGAC CGTACGCCCG
AACCTGCAAT ACATCACTCA TCCGGGCGGT GTGGATGAAG TGGATAACGC TTTGGTCGCT
GGCCTGAAAA TTCAGTCTAC GTTCTGA
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| Protein sequence | MKKNNNAQRI GQLSAVAAMM LAGSVHAADA FSSDSEWMTG DWGGERTKLI EQGIDIKMDY
VGEVGGNLHG GYNNDKTARY SDQFGLGVAL DLQKLWGWDN TQAKIQLTNR NGENISNDRV
GDPRAGTLSS SQEVYGRGHM VRLTQLWIKH QFFDNKLDVK AGYFGEGEDF NTFPCEFQNL
AFCGSQVGNW ATNIWYNWPV SQAAIRVKYN INDELYAQIG AYNQNPSQLE HGNGFKLSGS
GTKGTVLPVE LVWSPNPNGL PGEYRVGYYK STADADDVRE DVNGFDAATT GDAYRTHSSK
HGYWFVAQQQ LTSHNGDKSR GLSIAANATF HDKDTNFIDN YQSVMFVYKG PFDARPKDDF
GIGAARIHVN DDVKKNAELL NVSNGVSDYD NPVFAPIRET EYNYEINYGF HVTNWLTVRP
NLQYITHPGG VDEVDNALVA GLKIQSTF
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