Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4340 |
Symbol | |
ID | 3716159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4893674 |
End bp | 4895107 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_350068 |
Protein GI | 77460561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGC CCATGACTGC ACACGCCCCC GCCGCGCAAC GCGACGGCAT CGACCCCATA CGCGCCGCAC AGATTTCCGC CCGCATCGAC CGCCTCCCGG CAGTCGCCAC GATCTGGCGG CTGGTGGCGC TGCTGTCGAT CGGTGGTTTC TTCGAACTCT ACGATCTGTT CCAGACCGCC TATATCAGCC CCGGCCTGAT CCGCGATGGC ATCTTCGCCA TCGGCAATCA GGGCGTGTTC GGTTTCTCCG ATCAGGCCGC GTTCGCCTCG GCGACGTTCC TCGGACTGTT TCTCGGCGCC AGTCTGCTGA GCCCGATGGC GGATCGCTTC GGGCGGCGGG CGATCTTCAC TTTCGCGCTG GTCTGGTACA CCGTCGCCAC AGTTTTAATG GGCGTACAGA GTTCAGCGCT GGGGATCATC TGCATGCGTT TTCTGGTGGG TATCGGCCTC GGCATCGAAC TGGTGACCAT CGACGCCTAC CTCTCGGAAC TGGTGCCCAA GCGCATGCGC AGTTCGGCGT TTGCCTTCGC GTTTTTCGTG CAGTTCCTGT CGGTGCCGGC GGTGGCGCTG ATGTCCTGGT GGCTGGTGCC GCAGGCGCCG TTCGGCATCA GTGGCTGGCG TTGGGTGGTG TTGGCGAGCG CGGTGTTTGC GCTGTTCATC TGGTGGCTGC GCAAACGTCT GCCGGAGTCG CCGCGCTGGC TGGCGCAGCA TGGCCGCTTC GATGAGGCGA ACCGGATTCT CGACGGCATC GAGGCGCGTT GTGAGAAGGA TCACCGTCAG CCACTGGATG CGCCGGAAGC AGTAGCCGTC GATGTCGAGG GCAAGGGCCG TTTCGCCGAT ATCTGGCAGC CACCGTACCG GCGCCGCGCG CTGATGCTGA TTGTCTTCCA CATCTTCCAG GCGATCGGTT TCTTCGGCTT CGGCAACTGG CTGCCAGCGC TGCTTTCCGG TCAGGGTGTC AGCGTCACCC ACAGTCTGAT GTACGCGTTC ATCATCACCC TCGCCTACCC GCTCGGGCCG TTGCTGTTCG TCAAATTCGC CAACCGCTTC GAGAACAAGT GGCAGATCGT CGGCTCGGCC CTCGGCGCCA TGACTTTCGG CACCCTGTTC GCGTTGCAGA CCAGCGCCGT CGGCCTGATC TTCTGCGGTG TGATGATCAC CTTCTGCAAC GCCTGGCTGA GCTTCAGTTA CCACTCCTAT CAGAGCGAAC TGTTCCCCAC CAACATCCGC GCTCGGGCCG TCGGGTTCTG CTATTCGTTC AGTCGTTTGT CGACGGTGTT CAGCAGCCTG TTGATCGGTC TGTTCCTCGA CCACTTCGGG ACACCGGGCG TGTTGGCGTT CATCGTCGCC AGCATGTTGA TCGTGATGCT GACCATCGGC TGTTTCGGTC CTCGCACCCG AAACCTGGCG CTGGAAAACA TCGCCCATCG CTGA
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Protein sequence | MDQPMTAHAP AAQRDGIDPI RAAQISARID RLPAVATIWR LVALLSIGGF FELYDLFQTA YISPGLIRDG IFAIGNQGVF GFSDQAAFAS ATFLGLFLGA SLLSPMADRF GRRAIFTFAL VWYTVATVLM GVQSSALGII CMRFLVGIGL GIELVTIDAY LSELVPKRMR SSAFAFAFFV QFLSVPAVAL MSWWLVPQAP FGISGWRWVV LASAVFALFI WWLRKRLPES PRWLAQHGRF DEANRILDGI EARCEKDHRQ PLDAPEAVAV DVEGKGRFAD IWQPPYRRRA LMLIVFHIFQ AIGFFGFGNW LPALLSGQGV SVTHSLMYAF IITLAYPLGP LLFVKFANRF ENKWQIVGSA LGAMTFGTLF ALQTSAVGLI FCGVMITFCN AWLSFSYHSY QSELFPTNIR ARAVGFCYSF SRLSTVFSSL LIGLFLDHFG TPGVLAFIVA SMLIVMLTIG CFGPRTRNLA LENIAHR
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