Gene Pfl01_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4340 
Symbol 
ID3716159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4893674 
End bp4895107 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content62% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_350068 
Protein GI77460561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGC CCATGACTGC ACACGCCCCC GCCGCGCAAC GCGACGGCAT CGACCCCATA 
CGCGCCGCAC AGATTTCCGC CCGCATCGAC CGCCTCCCGG CAGTCGCCAC GATCTGGCGG
CTGGTGGCGC TGCTGTCGAT CGGTGGTTTC TTCGAACTCT ACGATCTGTT CCAGACCGCC
TATATCAGCC CCGGCCTGAT CCGCGATGGC ATCTTCGCCA TCGGCAATCA GGGCGTGTTC
GGTTTCTCCG ATCAGGCCGC GTTCGCCTCG GCGACGTTCC TCGGACTGTT TCTCGGCGCC
AGTCTGCTGA GCCCGATGGC GGATCGCTTC GGGCGGCGGG CGATCTTCAC TTTCGCGCTG
GTCTGGTACA CCGTCGCCAC AGTTTTAATG GGCGTACAGA GTTCAGCGCT GGGGATCATC
TGCATGCGTT TTCTGGTGGG TATCGGCCTC GGCATCGAAC TGGTGACCAT CGACGCCTAC
CTCTCGGAAC TGGTGCCCAA GCGCATGCGC AGTTCGGCGT TTGCCTTCGC GTTTTTCGTG
CAGTTCCTGT CGGTGCCGGC GGTGGCGCTG ATGTCCTGGT GGCTGGTGCC GCAGGCGCCG
TTCGGCATCA GTGGCTGGCG TTGGGTGGTG TTGGCGAGCG CGGTGTTTGC GCTGTTCATC
TGGTGGCTGC GCAAACGTCT GCCGGAGTCG CCGCGCTGGC TGGCGCAGCA TGGCCGCTTC
GATGAGGCGA ACCGGATTCT CGACGGCATC GAGGCGCGTT GTGAGAAGGA TCACCGTCAG
CCACTGGATG CGCCGGAAGC AGTAGCCGTC GATGTCGAGG GCAAGGGCCG TTTCGCCGAT
ATCTGGCAGC CACCGTACCG GCGCCGCGCG CTGATGCTGA TTGTCTTCCA CATCTTCCAG
GCGATCGGTT TCTTCGGCTT CGGCAACTGG CTGCCAGCGC TGCTTTCCGG TCAGGGTGTC
AGCGTCACCC ACAGTCTGAT GTACGCGTTC ATCATCACCC TCGCCTACCC GCTCGGGCCG
TTGCTGTTCG TCAAATTCGC CAACCGCTTC GAGAACAAGT GGCAGATCGT CGGCTCGGCC
CTCGGCGCCA TGACTTTCGG CACCCTGTTC GCGTTGCAGA CCAGCGCCGT CGGCCTGATC
TTCTGCGGTG TGATGATCAC CTTCTGCAAC GCCTGGCTGA GCTTCAGTTA CCACTCCTAT
CAGAGCGAAC TGTTCCCCAC CAACATCCGC GCTCGGGCCG TCGGGTTCTG CTATTCGTTC
AGTCGTTTGT CGACGGTGTT CAGCAGCCTG TTGATCGGTC TGTTCCTCGA CCACTTCGGG
ACACCGGGCG TGTTGGCGTT CATCGTCGCC AGCATGTTGA TCGTGATGCT GACCATCGGC
TGTTTCGGTC CTCGCACCCG AAACCTGGCG CTGGAAAACA TCGCCCATCG CTGA
 
Protein sequence
MDQPMTAHAP AAQRDGIDPI RAAQISARID RLPAVATIWR LVALLSIGGF FELYDLFQTA 
YISPGLIRDG IFAIGNQGVF GFSDQAAFAS ATFLGLFLGA SLLSPMADRF GRRAIFTFAL
VWYTVATVLM GVQSSALGII CMRFLVGIGL GIELVTIDAY LSELVPKRMR SSAFAFAFFV
QFLSVPAVAL MSWWLVPQAP FGISGWRWVV LASAVFALFI WWLRKRLPES PRWLAQHGRF
DEANRILDGI EARCEKDHRQ PLDAPEAVAV DVEGKGRFAD IWQPPYRRRA LMLIVFHIFQ
AIGFFGFGNW LPALLSGQGV SVTHSLMYAF IITLAYPLGP LLFVKFANRF ENKWQIVGSA
LGAMTFGTLF ALQTSAVGLI FCGVMITFCN AWLSFSYHSY QSELFPTNIR ARAVGFCYSF
SRLSTVFSSL LIGLFLDHFG TPGVLAFIVA SMLIVMLTIG CFGPRTRNLA LENIAHR